Gene Bpro_1618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_1618 
Symbol 
ID4015751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp1670161 
End bp1670874 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content64% 
IMG OID637941290 
ProductABC transporter related 
Protein accessionYP_548452 
Protein GI91787500 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.458838 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAATC TGTTGATTGA TGCGAAAGAG ATCCACACCT ACTACGGGGC CAGCCACATC 
CTGCGCGGCA TCAACTTCCG GGTGGCGCGC GGTGAGACGA TTGGCCTGAT GGGGCGCAAT
GGCATGGGCA AGAGCACCTT GCTCAAGAGC CTGATGGGGC TGGTCAGGCC GCGCTCGGGC
TCGATCGACA TCATGGGCCG GCCGATGCTG GGCCGGGCGC CGTATGAGGT GTCGCGGCTG
GGCGTGGCCT ATGTGCCGGA GGGCCGGGGC ATCTTTGGCA ACCTGAGTGT GGTGGAGAAC
CTGAAGATGG CGGCGCGCGC GGGCACGCGG GGCCAGCGCG ACTGGACCTA TGAGCGGGTG
CTGGAGACGT TTCCGCGCCT GAAGGAGCGC CTGGGCCATG GCGGCCAGCA GCTGTCGGGC
GGGGAGCAGC AGATGCTGAC GATTGGCCGG GCGCTGATGA CCAATCCGGA TGTGCTGATC
CTGGATGAGG CCACCGAGGG CCTGGCGCCG CTGATTGCCC GGGACATCTG GCGCATCTGC
CAGATCGTGC GGGAAACAGG CATCTCCAGC GTCATCGTGG ACAAGAACTG GAAGCATGTC
ACGCAGATCA CCGACCGCAA TGTGATCCTG GTCAAGGGCC AGGTGGTGTT CGAGGGCTCC
TCCGACGAGC TGCACGCCAG GCCTGAACTG CTTGAGCTGT ATCTGGGGGT TTGA
 
Protein sequence
MTNLLIDAKE IHTYYGASHI LRGINFRVAR GETIGLMGRN GMGKSTLLKS LMGLVRPRSG 
SIDIMGRPML GRAPYEVSRL GVAYVPEGRG IFGNLSVVEN LKMAARAGTR GQRDWTYERV
LETFPRLKER LGHGGQQLSG GEQQMLTIGR ALMTNPDVLI LDEATEGLAP LIARDIWRIC
QIVRETGISS VIVDKNWKHV TQITDRNVIL VKGQVVFEGS SDELHARPEL LELYLGV