| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1617 |
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| Symbol | |
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| ID | 4015750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 1668947 |
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| End bp | 1670101 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637941289 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_548451 |
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| Protein GI | 91787499 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.460677 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA TCTCCTCGCC TCTCCTCGCC CGGCTTCTTC TCGCCACACT CTGCAGTTTT
TCCAGCGCCG GCCACGCTGC GCAGGAGATT GTTTTTGGGC AGGTTGCATC GCAAACCAAC
CCGGCGTCGG CAGCCAACGC CAAGGGCCTT GCCGTTGGCA TCCAGACTTA CTTCGCCAAA
GTCAACGCCA AAGGCGGCAT CGCGGGCAAC AAGCTCAAGC TGGTGACGCT TGACGATGAC
CTGCAGGGCC CGAAAATGCT GGAACTGACC CAGCAGCTGG TTGCCGACCC CTCCATTGTT
GGCCTGCTGG GCTTCCTCAA CAGCGCAGGG CTGGCTGAAA TGGCCAAACA GGATTTGCCC
GTGAAGGCGG GCATCGCGTT GATCACACCG CTTCAGGGTG ACAAGCATGT GATCAGCGCC
GGAAATGTAT TTCCTCTGCG CAGTGGTTAC GCGGACGAAG TCACTGCCTT GCTCAAGGAA
GCAAAGAGTT GGGACAAGAA CGAAGTCGCG ATCGTCAACA TGAACATTGC TTTTGGACCG
CCCCTGGCCC AACTGGCAAT CCAGCAGGCC AATGCACAAG GCCTGAAAAT CGCTACCCAT
CAAGTGATTG ATGTCAGTCC CGCAGCATTT GACGCCAGCG TTAAAGCGGC GGTTGCAGCA
GTGTCGAAGT CCCAGCCGAA AGCAGTCCTG GTGCTGGCCG CCGGCAAACC CGCCTCTGAA
TTCATCAGGG CCTTCCGCGA GGCACCGGGT GGCGCTACCC AGGTCTATGG GCTGTCTGTA
CTGTTGCACG ACGCGCTGGT CAACGCCGTT GGCGCAGACA AGGCGCGGGG TATCGTGTTG
AGCCAGGCGG TTCCCTACCC CTTCATTCCA AGCAAGGCCG TCATCAACGA ATACCTGACG
GACATGAATA AATATGCGGC AGGACAGCCA CTCTCCTTCT CCAGCCTTGA GGGCTACCTG
GGCGCCAAGA TAGCCGCAGA AGCAGTGCAC CGGGCAGGCA GTCAACCCAC ACGAGCGAAA
GTCCTGGCGG CATTGACGAA CCTGGGTGAG TTCGATCTGG GTGGACTCTA TGTCAAATAC
ACGCCAGTCA AACGCCAGGG CTGGGGAGGC GTGGAGCTTT CAATCATCAA TGGCCAGGGA
GCGCTAAAAA AATAA
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| Protein sequence | MKKISSPLLA RLLLATLCSF SSAGHAAQEI VFGQVASQTN PASAANAKGL AVGIQTYFAK
VNAKGGIAGN KLKLVTLDDD LQGPKMLELT QQLVADPSIV GLLGFLNSAG LAEMAKQDLP
VKAGIALITP LQGDKHVISA GNVFPLRSGY ADEVTALLKE AKSWDKNEVA IVNMNIAFGP
PLAQLAIQQA NAQGLKIATH QVIDVSPAAF DASVKAAVAA VSKSQPKAVL VLAAGKPASE
FIRAFREAPG GATQVYGLSV LLHDALVNAV GADKARGIVL SQAVPYPFIP SKAVINEYLT
DMNKYAAGQP LSFSSLEGYL GAKIAAEAVH RAGSQPTRAK VLAALTNLGE FDLGGLYVKY
TPVKRQGWGG VELSIINGQG ALKK
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