Gene Bpro_1546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_1546 
Symbol 
ID4015825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp1596845 
End bp1597678 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content55% 
IMG OID637941222 
Producthypothetical protein 
Protein accessionYP_548388 
Protein GI91787436 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2856] Predicted Zn peptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.275251 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.799825 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGTC TGGATTTATC CAGGATTGAT ACGGATCTGT CGGTCTACAT CCAAAAGGTC 
AAGGCCAAGC TGAAAACCGA GGAAATGGAC GAAGGTGAGT CCGGCTACAC GTTAACCAAA
CGGGATGGGA CGTCAACCAT CATCGTGAAT GAGTTGGAAC GGCGTGAGCG CCAGAGATTC
TCCGCTTGCC ATGAGATCGG GCATATCGTG CTTGAACTGA GCTCCAATCA CAAGGAGACT
CCGGCTTGGT CTTACGCTAA ACGTGAAGAC AACGAAATTG CCTGCGACAT GTTCGCGGCT
GAGCTGCTAA TGCCGTATGA CCAATTCAAA GCCGATGTGG ATAAGGCGGA GCCTTCTTTT
GAGTTGGTTG AGCGCCTTCG TGCCAAGTAT GTAACTTCGT TTTCCGCCAC GGCCTCACGG
GTCGCCGCCG TCACGGACTA CCCCTGTGCT TTTGTCACGA TGAACTCCAG TGTCATTCGC
CACGCATCGC GCTCTGCAGC GCTGCGCACG CTGAATGCCT GGATAGCGCC GAAATCGCCC
ATCCCCGACG GCTCCGTGGC CCGTCAGCTG GTGAAGGATG GTCAGCGTTC AGGCGAATCT
CCAGATGTTT CCCAAGACGT ATGGTTCCAA GACTGGCCTC AAGGTTATGA CCTTACCGAG
CTGGCCAAGC ACTATTCCCA ATATGACGAA ACCTTCGCAC TGCTTTGGTT TGAGGGCGAT
AGTGGTCCAG AAGAGCCGGT CAATACGTTC TCGGGAAAGC CGCAAGAGGA TGATGGTGGG
CTCAAGGAAC TGGATGGGGT CTTACAGTTC TCGAAGCGGA CGAAGCGCAG GTAG
 
Protein sequence
MAGLDLSRID TDLSVYIQKV KAKLKTEEMD EGESGYTLTK RDGTSTIIVN ELERRERQRF 
SACHEIGHIV LELSSNHKET PAWSYAKRED NEIACDMFAA ELLMPYDQFK ADVDKAEPSF
ELVERLRAKY VTSFSATASR VAAVTDYPCA FVTMNSSVIR HASRSAALRT LNAWIAPKSP
IPDGSVARQL VKDGQRSGES PDVSQDVWFQ DWPQGYDLTE LAKHYSQYDE TFALLWFEGD
SGPEEPVNTF SGKPQEDDGG LKELDGVLQF SKRTKRR