| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1493 |
|---|
| Symbol | |
|---|
| ID | 4015850 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 1548865 |
|---|
| End bp | 1550052 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637941173 |
|---|
| Product | mandelate racemase/muconate lactonizing enzyme |
|---|
| Protein accession | YP_548339 |
|---|
| Protein GI | 91787387 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
|---|
| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.227667 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAACA TGCCGACCAT CAAGCACGTG CGTGCCTTCA CCGTCCGCGG CGGCGGCGCC
GACTACCACG ACCAGGGCTC CGGCCACTGG ATCGACGACC ATATCTCCAC ACCGATGGGG
CGTTACCCCG AATATCGCCA GAGTCGCCAG TCCTTCGGCA TCAATGTGCT GGGCACGCTG
GTGGTGGAAA TCGAGGCCAG CGACGGCACG GTGGGGTTTT CGGTGACGAC CGGCGGTGAA
CTCGGCTGCT GGATCGTCGA GAAGCACCTG GCGCGCTTTA TCGAAGGCGC CAAGGTCACC
GACATCGAGA AGATCTGGGA CCAGATGTTC AACGCCACGC TGTACTACGG GCGCAAGGGC
ATTGTGCTGA ACACCATCTC GGGCGTGGAC CTGGCGCTGT GGGACCTGCT GGCCAAGGTG
CGCAAGGAGC CGGTGCACGC CCTGCTGGGT GGCCCGGTGC GCGACGAATT GACCTTCTAC
GCCACCGGGG CCCGCCCCGA CCTGGCCAAG AAAATGGGCT TCATCGGCGG CAAGCTGCCG
CTGCACCATG GCCCCGCCGA GCGGGAGGAG GGCCTGAAGA AAAACCTCGA ACTGCTGGGC
GAAATGCGCC AGCGCGTAGG CGACGATTTC TGGCTGATGT ACGACTGCTG GATGAGCCTG
GATGTAGAGT ACGCCACGCG CCTGGCCAAC GCGGCCAGCG AGTACAAGCT CAAGTGGATC
GAAGAAGCCC TGCCGCCCGA CGACTACTGG GGCTACGCCG AGCTGCGCCG CAACGTGCCG
CGCGGCATGC TGGTCACCAC CGGCGAGCAC GAAGCCACGC GCTGGGGCTT CCGCATGCTG
CTCGAGATGG AGTGCTGCGA CATTCTGCAG CCCGACGTCG GCTGGTGCGG CGGCATCACC
GAACTGCTGA AAATATCGGC ACTGGCCGAT GCACACGGCA AGCTGGTGGT GCCCCACGGC
TCGTCGGTCT ACAGCTACCA CTTCGTCATC ACGCGCCACA ACAGCCCGTT TTCCGAGTTT
CTGATGATGG CGCCCAAGGC CGACGAGGTG GTGCCGATGT TCAACCCCAT GCTGCTGGAC
GAGCCGGTGC CGGTGAACGG CCGCATGAAG GCCAGCGCGC TCGATGCGCC GGGCTTCGGC
GTGCGGCTCA ACCCCGAATG CGCCTTGCAG CGGCCATTCC CCCGCTGA
|
|---|
| Protein sequence | MNNMPTIKHV RAFTVRGGGA DYHDQGSGHW IDDHISTPMG RYPEYRQSRQ SFGINVLGTL
VVEIEASDGT VGFSVTTGGE LGCWIVEKHL ARFIEGAKVT DIEKIWDQMF NATLYYGRKG
IVLNTISGVD LALWDLLAKV RKEPVHALLG GPVRDELTFY ATGARPDLAK KMGFIGGKLP
LHHGPAEREE GLKKNLELLG EMRQRVGDDF WLMYDCWMSL DVEYATRLAN AASEYKLKWI
EEALPPDDYW GYAELRRNVP RGMLVTTGEH EATRWGFRML LEMECCDILQ PDVGWCGGIT
ELLKISALAD AHGKLVVPHG SSVYSYHFVI TRHNSPFSEF LMMAPKADEV VPMFNPMLLD
EPVPVNGRMK ASALDAPGFG VRLNPECALQ RPFPR
|
|---|
| |