| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1492 |
|---|
| Symbol | |
|---|
| ID | 4015849 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 1547505 |
|---|
| End bp | 1548815 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637941172 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_548338 |
|---|
| Protein GI | 91787386 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.432528 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCCC AAATCAACCC CGAACTCGAG CGGGTCACGG CCAAGGCCAT TCGCCGGCTC
GTGCCTTTTC TTTTGCTGAT GTATGTGCTG GCCTTTCTGG ACCGCGCCAA CATCGGCTTT
GCCAAGCAGG CCTTCCAGCT CGACACCGGC GTGTCGAACG CCGCTTATGC CTTCGGCGCC
GGCATCTTCT TCATTGGCTA CGCGCTGTTC GAAGTTCCCA GCAACCTGAT CATGCACCGC
GTCGGCGCCC GCGCCTGGAT GTGCCGCATC ATGGTCACGT GGGGGCTGGT GTCGGCGGCG
CTGATGTTCG TCACCAGCGA GACCTCGTTT TACGTGCTGC GCTTTCTGCT CGGCGTGGCC
GAAGCGGGCT TCTTTCCCGG CGTGATCTAT TTCCTCACGA AGTGGTTCCC GGTCCATGCG
CGGACCCGCG TGATCGGCAT GTTTTATTTC GGCGCGCCAC TGGCTTTCAT TTTTGGCAGC
CCGCTGTCGG GACTCCTGCT GGAAATGCAG GGCGCGTTCG GCCTGCACGG CTGGCAGTGG
ATGTTTCTCA TTGAAGGCCT GCTGGCCAGC GCGGTCGGCG TCTGGGCCTT CTGGTACCTG
GACAACCGGC CTGAAGATGC GAAGTGGCTG ACGCTGGCCG AGCGTGCCAC GCTGGCCACG
GCAATTGCCC GGGAAGAGCA GCACAAGGCC GAGCATGGAC CGCGCAGCGT GCTGGCCGCG
CTGACCAATG GGCGCGTGCT CTTCCTGGCG GCAATCTATT TCATCATCCA GATGAGCGTT
TACGGCGTCG TGTTCTACCT GCCCACCCAA GTAGCGACAC TGCTGGGCAA GAAGGTCGGC
TTCGACGTCG GCCTGGTGAC GGCCATTCCC TGGATTTGCG CCGTCATTGC CGTCTACCTG
ATTCCCCGCC TGGCCGAGCG CCGGCAGCAG CACGCCGGCA TGGCCTGCGC GACGCTGGTG
GTTTGCGCCG CGGGCATTGC CCTGTCGGTG TCGGCCGGCT CACCGCTGCT GTCGTTGATT
GCGCTGTGCT TTGCCGCCGC CGGCTTCATC GCCGTCCAGC CCCTGTTCTG GACCTTCCCG
ACGGCCTACC TTGGTGGCGC TGCAGCGGCC GGTGGCATTG CACTGATCAA CTCGATCGGC
TCGCTGGGCG GCTTCTTTGC ACCGAACGTC AAGACCTGGG CCGAAAAAGC TTTCGAGTCG
CCAAGCGCCG GGCTGTACCT GCTGGCCGGT ACAACGCTGC TGGGCGCAGT GCTGTTCCTG
GCGCTGCGCG CCCGGCAGCC CGTAGCAGTC GCAGTGGTCC GCTCGGCCTG A
|
|---|
| Protein sequence | MNPQINPELE RVTAKAIRRL VPFLLLMYVL AFLDRANIGF AKQAFQLDTG VSNAAYAFGA
GIFFIGYALF EVPSNLIMHR VGARAWMCRI MVTWGLVSAA LMFVTSETSF YVLRFLLGVA
EAGFFPGVIY FLTKWFPVHA RTRVIGMFYF GAPLAFIFGS PLSGLLLEMQ GAFGLHGWQW
MFLIEGLLAS AVGVWAFWYL DNRPEDAKWL TLAERATLAT AIAREEQHKA EHGPRSVLAA
LTNGRVLFLA AIYFIIQMSV YGVVFYLPTQ VATLLGKKVG FDVGLVTAIP WICAVIAVYL
IPRLAERRQQ HAGMACATLV VCAAGIALSV SAGSPLLSLI ALCFAAAGFI AVQPLFWTFP
TAYLGGAAAA GGIALINSIG SLGGFFAPNV KTWAEKAFES PSAGLYLLAG TTLLGAVLFL
ALRARQPVAV AVVRSA
|
|---|
| |