Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_1491 |
Symbol | |
ID | 4015848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 1546646 |
End bp | 1547398 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637941171 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_548337 |
Protein GI | 91787385 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.117153 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCAGC TCGATCTGAA TCAACGCGTC GCCGTCATCA CCGGTGGCGC CCAGGGCATG GGCTACGCCA CGGCGCAACG AATGCTCGCC TCCGGCGCAG CGGTGGCCCT GTGGGACATC GATGCGCAGC GCCTGGCGCA GGCCAGGGAG ACGCTCAAGC CTTCCGGCAA GGTCATCACC GCGGTGGTCG AGCTGACGGA CGAGGCCTCG GTGGAGGCGG CCACGCAGGC CACGCTGGCT GCGTTCGGGC GCATCGACAT CCTCGTCAAC AATGCCGGCA TCACCGGCGG CAACGGCACG ACCTGGGAAC TGGCGCCCGA GGTATGGCGC CGGGTGATCG AGGTCAACCT GATCGGCCCC TATCTCACCA GCCGCGCCAT CGTGCCGCAC ATGGTCAAGC AGGGCTATGG CCGCATCGTC AACATCGCCT CGGTGGCGGG CAAGGAAGGC AATCCGAACG CCTCGCACTA CAGCGCATCG AAGGCCGGCC TGATTGGCCT GACCAAGTCG CTGGGCAAGG AGCTGGCGAA GACCGGGGTG CTGGTCAATG CCGTGACGCC TGCTGCGGCC AAGACGGCAA TCTTCGACTC GATGAAGCAG GAGCACATCG ACTTCATGCT GTCGAAAATC CCGATGGGCC GCTTCCTGCA GGTCGATGAA GCCGCATCGC TGATCGGCTG GCTGGCCTCC GAAGACTGTG CCTTCAGCAC CGGCGCAGTA TTTGACCTGT CGGGCGGACG CGCCACCTAC TGA
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Protein sequence | MNQLDLNQRV AVITGGAQGM GYATAQRMLA SGAAVALWDI DAQRLAQARE TLKPSGKVIT AVVELTDEAS VEAATQATLA AFGRIDILVN NAGITGGNGT TWELAPEVWR RVIEVNLIGP YLTSRAIVPH MVKQGYGRIV NIASVAGKEG NPNASHYSAS KAGLIGLTKS LGKELAKTGV LVNAVTPAAA KTAIFDSMKQ EHIDFMLSKI PMGRFLQVDE AASLIGWLAS EDCAFSTGAV FDLSGGRATY
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