| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1485 |
|---|
| Symbol | |
|---|
| ID | 4010919 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 1539879 |
|---|
| End bp | 1540799 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637941165 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_548331 |
|---|
| Protein GI | 91787379 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1079] Uncharacterized ABC-type transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.104573 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATCCT ATGCACTGCT GTTTGCCGCC ACGCTCAGCG CGGGCACGGT TCTGGCCATT
GCCGGGCTGG GCCTGCTGAT CAACGAAAAG GCCGGCATCG TCAACCTGGG TGCCGAAGGC
ATGCTCTTGT GCGCGGCGAT TGCCGGCTTT GCCACTGTGG TGCACACCGG CAATACCTGG
CTGGGTTTTG CCGCGGGCAT GGCGGCCGGG GCCGTGCTGG CGGCCATCTT TGGCGTGCTG
GTGATCTGGC TCAATACCAA CCAGTACGCC ACCGGGCTGG CGCTCAGTCT TTTCGGCGTG
GGCTTTTCGG CTTTTGCCGG CATCCCCTAT GTGCAGGCCA AGTTGCCCGA GCGCACACCG
CTGGAGCTTC CGGTGCTCAG CGACCTTCCG TTGCTGGGGC CGGCGCTGTT TCGCCAGCAC
CCCCTGGTCT ACCTGACCAT TGCGCTGGCG TTTGGCTTGA TCTGGTTTCT CTACCGTACA
CGCGCCGGCC TGGTGCTCAG GGCGGTGGGC GAATCGCCCG AGTCGGCCCA TGCGCTGGGC
TACCCGGTGC GGCGCATCCG CCTGGCGGCG GTGGTTGCGG GCGGTGCCCT GTGCGGCCTC
GCCGGGGCCT ACATTTCCAC GGTCTACACC CCGTTGTGGG TTGAAGGCAT GGTGGCCGGC
CGGGGCTGGA TCGCGCTGGC GCTGACCACC TTTGCCACCT GGCGCCCGGC CCGGGTTTTG
CTTGGGGCTT ACCTGTTTGG CGGTGTGACC ATGCTGCAGT TCCACCTGCA GGGCGCGGGG
GTGAATGTTC CCAGCCAGTT CCTGAGCATG TTGCCTTACC TGGCTACCAT CGTGGTGCTG
GCGCTGATTT CACGCAATCC CCAGTGGATA CGCGTGAACA TGCCGGGCTC CATTGGCAAA
CCGTTTTACC CTGGGTCCTG A
|
|---|
| Protein sequence | MESYALLFAA TLSAGTVLAI AGLGLLINEK AGIVNLGAEG MLLCAAIAGF ATVVHTGNTW
LGFAAGMAAG AVLAAIFGVL VIWLNTNQYA TGLALSLFGV GFSAFAGIPY VQAKLPERTP
LELPVLSDLP LLGPALFRQH PLVYLTIALA FGLIWFLYRT RAGLVLRAVG ESPESAHALG
YPVRRIRLAA VVAGGALCGL AGAYISTVYT PLWVEGMVAG RGWIALALTT FATWRPARVL
LGAYLFGGVT MLQFHLQGAG VNVPSQFLSM LPYLATIVVL ALISRNPQWI RVNMPGSIGK
PFYPGS
|
|---|
| |