| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1483 |
|---|
| Symbol | |
|---|
| ID | 4010917 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 1537236 |
|---|
| End bp | 1538780 |
|---|
| Gene Length | 1545 bp |
|---|
| Protein Length | 514 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637941163 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_548329 |
|---|
| Protein GI | 91787377 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3845] ABC-type uncharacterized transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0560385 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGCGGGG GTGCGCCACC CCGGCTGCAG CTTGCGGGCA TCACCAAGCG CTACCCCGGC
GTGCTGGCCA ACAGCGACAT TGCACTGACG GTGCAGCCCG GCGAGATCCA TGCCGTGCTG
GGTGAAAACG GTGCCGGCAA ATCCACCCTG ATGAAAATCA TCTATGGCTC GGTCAAGCCC
GACGCCGGCA GCGTGGTGAT GGACGGCCAG CCGGTGCTGG TGCGCAACCC GCACGAGGCG
CGCGCCTTGG GCATCAGCAT GGTGTTTCAG CATTTCAGCC TGTTTGACAC GCTGACGGTG
GCCGAAAACG TCTGGCTCGG GCTGGACAAG CTGCGCCTGG CCGAGGTGTC GCAGCGCATC
ACGCAAACGA CGCAGGCCTA CGGACTGGAG CTCGACCCGA CGCGGCCCGT GCACACCCTG
AGCGTGGGCG AGCGCCAGCG CGTGGAGATC GTGCGGGCAT TGCTGACCCA TCCCAAACTG
CTGATCCTCG ACGAGCCCAC CTCGGTGCTG ACGCCGCAAG CGGTGGAGAG CCTGTTCGTC
ACGCTGCGCC GGCTGGCGGA GCAGGGCTGC AGCATTTTGT ACATCAGCCA CAAGCTCCAT
GAAATCCGCG CGCTCTGTAC CGCCTGCACC GTGCTGCGCG GCGGGCGCGT CTCGGGGGTC
TGCGATCCGC GCCAGGAGTC CAATGCCTCG CTGAGCCGGC TGATGATTGG CGCCGAGCCG
CCGGCCCTGG AGCACCGCGA GGTGCAGGTC GGTGCGACCG TGCTCGACGT GCGCGGGCTG
AGCCTGGCCC GTGAGGAGCA ATTCGGCGTG GACTTGCAGC GGGTCGCCCT GCAGGTCTGT
GCCGGCGAGG TGGTCGGCAT TGCCGGTGTG TCGGGCAACG GGCAAAAAGA ACTGCTGTAC
GCCCTGTCCG GCGAAGACAC GCGGGCTGCC GCGGGCACCA TCCTGGTCAG AAACCAGGAC
GCCGGAAGGC TGGGCCCGAT GCAGCGCCGC GAGCTGGGTC TGAACTTTGT GCCCGAGGAG
CGGCTGGGGC GCGGTGCCGT GCCCACGCTG GGGCTGGCGC ACAACCTGCT GCTGACGCGG
GGCGATGCCG TGAAGGCGGG GGGCTGGATT CATCTGGCTG GTTTGCAGGC GCAGGCCGAG
GGCATCATCG GGCGCTACAA CGTGAAAGCC AACGGAGCCA ATGCCGCGGC GATGTCGCTG
TCGGGCGGCA ACCTGCAGAA ATTCATTGTC GGCCGCGAGA TTGAGGCCAA GCCCAGCCTG
CTGATCGTCT CGCAGCCGAC CTGGGGTGTT GACGTCGGGG CCGCCGCGCA AATCCGTGGC
GAGATTTTGA AACTGCGCGA CAGCGGCTGT GCCGTGCTGG TGGTCAGCGA AGAGCTGGAA
GAGCTGTTCG AAATCTGTGA CCGCCTCTAC GTCATGGCCA AAGGGCAGCT CTCGCCCTCG
CTGCGGCGCG CCGACGCGAC GGTGGAGCGG GTGGGGCAGT GGATGAGCGG GCTGTGGGAT
CAAGGTGCCC CAACGGGAAA AGGAGTTCCA CATGCTGCGG CTTGA
|
|---|
| Protein sequence | MGGGAPPRLQ LAGITKRYPG VLANSDIALT VQPGEIHAVL GENGAGKSTL MKIIYGSVKP
DAGSVVMDGQ PVLVRNPHEA RALGISMVFQ HFSLFDTLTV AENVWLGLDK LRLAEVSQRI
TQTTQAYGLE LDPTRPVHTL SVGERQRVEI VRALLTHPKL LILDEPTSVL TPQAVESLFV
TLRRLAEQGC SILYISHKLH EIRALCTACT VLRGGRVSGV CDPRQESNAS LSRLMIGAEP
PALEHREVQV GATVLDVRGL SLAREEQFGV DLQRVALQVC AGEVVGIAGV SGNGQKELLY
ALSGEDTRAA AGTILVRNQD AGRLGPMQRR ELGLNFVPEE RLGRGAVPTL GLAHNLLLTR
GDAVKAGGWI HLAGLQAQAE GIIGRYNVKA NGANAAAMSL SGGNLQKFIV GREIEAKPSL
LIVSQPTWGV DVGAAAQIRG EILKLRDSGC AVLVVSEELE ELFEICDRLY VMAKGQLSPS
LRRADATVER VGQWMSGLWD QGAPTGKGVP HAAA
|
|---|
| |