| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1458 |
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| Symbol | |
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| ID | 4012339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 1508391 |
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| End bp | 1509266 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637941137 |
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| Product | xylose isomerase-like TIM barrel |
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| Protein accession | YP_548304 |
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| Protein GI | 91787352 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.894735 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.314242 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCGA TCCCCTACCG CAAGGAACGC ATTGTTTCCA TTTCGGGCGC CCCCTACGAC
GGGCATCCGG TGCCGGCCAT GCTGGCCAGC ATGGCCGCCT GCGGCGCCCG TCATATCGAG
CCGGCCTTCA TCGTCGGTTA CACGGAGGCC TTCGACGAAA CGGCATTCGT ACCCGCGCAG
GCACAGCAGT GGCGACACTG GCTGGCCGAC GCCGGTATGG CCTGCCATGC GATGTCGTCG
CACATTGACC TGGGCCGCGA TGACGCTGTC GAGGTGTTTC GCGGCCGGAT GGATTTCGCC
CGCGCCCTGG GCGCCGAGGT GATCAATACC AATGCCGCGG CGCGCAAGCT CAAGAAGCGG
TTTTTCACCA ATATCGAGGT GCTCGCCCGC CATGCGGAGT CCATCGGCCT GCGTATCGGC
CTGGAAAATC CCGGCGACGG CTCCGACAAC CTGCTCAACA CGGCCGCGGA CGGCCCCGGT
CTGCTGGCCG ATATTGGTCA CCCCATGGTG GGCCTGAACT ACGACGCGGG CAACACCATT
TCGCACCGGC CTGGCGTGAC GCCTGCGGAC GACGCACTGG CAGCCATGCC GCAGTGCCTG
CACACCCACA TCAAGGATGT GCGCAAGGAC GACAACGGCT ACTTCTTCAC CCCGCTGGGC
CAGGGCCAGA TTGACTGCGC GCGCATCCTG CACGCCGTCG CGCAAACCGC GCTCAACCTG
TCCGTCGAGA TACCGCTGCG CCTGCACCGC CAGCCCAGTG CCCAGCCCAG CCGCGCGCCC
TACCGCGTGC CGCTGGCTGA CATCGAGGCG GTGCTGCGGC CCGCGCTGGC CTTTGTCCAT
GAACACCTGG GCGCGCCGTC TGCGACCCGC CTCTGA
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| Protein sequence | MNPIPYRKER IVSISGAPYD GHPVPAMLAS MAACGARHIE PAFIVGYTEA FDETAFVPAQ
AQQWRHWLAD AGMACHAMSS HIDLGRDDAV EVFRGRMDFA RALGAEVINT NAAARKLKKR
FFTNIEVLAR HAESIGLRIG LENPGDGSDN LLNTAADGPG LLADIGHPMV GLNYDAGNTI
SHRPGVTPAD DALAAMPQCL HTHIKDVRKD DNGYFFTPLG QGQIDCARIL HAVAQTALNL
SVEIPLRLHR QPSAQPSRAP YRVPLADIEA VLRPALAFVH EHLGAPSATR L
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