| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1457 |
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| Symbol | |
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| ID | 4012338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 1507121 |
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| End bp | 1508380 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637941136 |
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| Product | TRAP dicarboxylate transporter- DctM subunit |
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| Protein accession | YP_548303 |
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| Protein GI | 91787351 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.205952 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.3347 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCGC TCATCCTCCT GGTGTTCCTG GGCGCTGCCA CGGCAGCGGT ACCGATTGCA
CATGCGCTGC TGATGGCCTC GGTGGCAGCC GCCACGGTCT CGGAGCGCAT CCCGCTGGAT
CTGGTCGTGC AGCAGATGGT GGCGCAGGTC CAGAGCTTCC CGCTGATTGC CATTCCCTTC
TTCATGCTCA CCGGAACCCT GATGATGGGC GGCAAGCTCG GTGAATCCCT GATCGGCGTG
CTGTCCACGC TGATTGGCCG CTTTCACGGC GGGCCGGGCC AGGTGGGCGT GCTGTCGTCC
ACCATTTTTG GCGGTGTCTC CGGCTCGGCG GTCGCCGACG CGTCCGCCAT CGGTTCGCTG
CTGCTTCCCT GGCAGAAGCG GCTGGGCTAT CCGCCCGCAT TCTCCGCCGC CACGCTGGCC
GCGGCCGCAA CGATTGACAT CCTGATTCCG CCATCGATTC CGATGATCCT GTTCGCGCTG
ACGTCCAATG CGTCGATCGC GGCGCTATTC GTCGCCGGCA TTTTGCCGGG GCTGATGATG
TGTGCCGGTT TCATGGGAGT CTGCTGGTGT GTTGGCAAGC GCCGCAATTT TCCGCGAGAG
ACGCGCCCGA TCGACTGGCC GGTATTTCGC AAGCAGCTGG CCTACGCTTC GCCCGCGCTG
GTGCTGCCGG TGCTGATCGT GATCTTCCTG CGCTTCGGTA TTGCCACGCC CACCGAGGTC
AGTGTCCTGT CCACCGCCTA CTCGGGCCTG ATTTCCGCGC TGATTTACCG CGATCTGAGC
ATCAGGCGCC TGCACTCGGC CATCGTGGAG GCGGGTCTGG CCACGGGCGT GGTGCTGCTG
GTGATCATGG CTTCGGCGTC GGTCGGGTGG TTGCTGACCT TCGACCACAT GCCCGACGGC
GTGGTGCACT GGGCCCAGGC TCACCTGCAC GCCGACTGGG CCGTGATCCT GCTGATGAAC
GGCCTCATGC TGGTTGCCGG CATGTTCATC GACCTGCCGG CTGCGGTGCT GCTGCTCACG
CCGGTGTTCG TGCCTCTGGC CAACAGCATC GGCATGGACC TGGTGCAGCT CGGCATCATG
ATGACGGTGA ACCTTGCCAT CGGGCTGTAC ACGCCCCCGG TGGGGACGAC GCTGTTCATC
ACCAGTTCGG TCGCCAGGGT CAAGGTGGGG GAAACCGTGC GCGAGCTGAT CCCCTTCTAT
TGTGTGGCGT TCATCATCCT GCTGATTGTT TCGTACGTTC CGGCGTCGAT CCTGCGTTGA
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| Protein sequence | MSALILLVFL GAATAAVPIA HALLMASVAA ATVSERIPLD LVVQQMVAQV QSFPLIAIPF
FMLTGTLMMG GKLGESLIGV LSTLIGRFHG GPGQVGVLSS TIFGGVSGSA VADASAIGSL
LLPWQKRLGY PPAFSAATLA AAATIDILIP PSIPMILFAL TSNASIAALF VAGILPGLMM
CAGFMGVCWC VGKRRNFPRE TRPIDWPVFR KQLAYASPAL VLPVLIVIFL RFGIATPTEV
SVLSTAYSGL ISALIYRDLS IRRLHSAIVE AGLATGVVLL VIMASASVGW LLTFDHMPDG
VVHWAQAHLH ADWAVILLMN GLMLVAGMFI DLPAAVLLLT PVFVPLANSI GMDLVQLGIM
MTVNLAIGLY TPPVGTTLFI TSSVARVKVG ETVRELIPFY CVAFIILLIV SYVPASILR
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