| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1455 |
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| Symbol | |
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| ID | 4012336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 1505560 |
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| End bp | 1506552 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637941134 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_548301 |
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| Protein GI | 91787349 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.534729 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.295585 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACGAT TCAACATTCT TCGCCGCGCT GCCCTGGTCG CCGCGCTGGC CTGCGCGGGT
GCAGTGAGCT TTGCCCAGTC CCCCGTCAAG CTCACGCTGG GGCACGGCGC CGCACCGGGC
AATCCGCGGC ACGAGGCGTC CCTCAAGTTC GCTGAAGTGG TCAAGGCCAA ATCGGCTGGT
CGCATCGAGG TTCAGGTGTC TCCATCGGCG CAACTGGGCG ACGACGCCGC GATGGTGACG
GCACTGCGGA CGGGTGCACT GGATCTGAGC GCCAATTCGC AGGGTGCGGT GGCGGCGGCC
GTGCCGGAAT ATGCGGCCTT CGGCATGCCT TTCCTGTTTG CCAACCTGCC GCAGGCGTGG
AAGCTGCTGG ACAGCGCGGT CGGCAAGGAG CTGGCGGACA AGTCGGCAGA AAAGGGGCTG
ATTGTCCTGG GTTACTGGGA CAACGGCATC CGCCACATGT CCAACAGCAA GAAGCCCATC
CTCAAACCCG AGGACATGAA GGGCCTGAAG ATGCGCACGC CACCCGACGC CGTCACGGTG
GACATCATGC AGTCGCTCGG CGCGGAGGCC CAGCAGATCA AGTTTGCCGA GCTCTACGTG
GCGCTGCAGC AGGGCGTGGT TGACGGCCAG GAAAACCCGC TGATGAACGT GTACGCCTCC
AAGCTGTACG AGGTCCAGAA GTTCATTTCA CTGACCAGCC ACAAATATGA GATGACGCCA
TTCCTGATGA GCAAGCGCAC CTGGGACAGG CTGTCCGACG CCGACAAGAC CGCTGTTCGC
GAGGCTGCCG CCGAGGCGAC CGCCTTGCAG CGCAGGTTGT CGCAGGAGTC CGACGAAAAG
CTGGTGGTCG ACCTGAAGGC CAAGGGTGTG CGCATCGATG TCGCGGACAA GGCTGCTTTT
GAGAAGGCCA CCTCCAAAGT CGACGAGAAA TGGCTGGCGA GTCCTATCGG TCCATTCGTC
AAGAGGGTCA TCACCGCCGC GCGCGGCGTC TGA
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| Protein sequence | MTRFNILRRA ALVAALACAG AVSFAQSPVK LTLGHGAAPG NPRHEASLKF AEVVKAKSAG
RIEVQVSPSA QLGDDAAMVT ALRTGALDLS ANSQGAVAAA VPEYAAFGMP FLFANLPQAW
KLLDSAVGKE LADKSAEKGL IVLGYWDNGI RHMSNSKKPI LKPEDMKGLK MRTPPDAVTV
DIMQSLGAEA QQIKFAELYV ALQQGVVDGQ ENPLMNVYAS KLYEVQKFIS LTSHKYEMTP
FLMSKRTWDR LSDADKTAVR EAAAEATALQ RRLSQESDEK LVVDLKAKGV RIDVADKAAF
EKATSKVDEK WLASPIGPFV KRVITAARGV
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