| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1448 |
|---|
| Symbol | |
|---|
| ID | 4011323 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 1498582 |
|---|
| End bp | 1499484 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637941127 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_548294 |
|---|
| Protein GI | 91787342 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0273001 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.589236 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGCACCA TTCGATTTCT CAGGACCTTT TTGGCTGTGG CACAAGAAGG CTCTTTCGCC
GGGGCCTCCG AGCGGGTCGC TTTGACGCAG GCTGCCGTCG GGCTGCAAAT GCGGGCGCTG
GAAGCCGAGC TGAAAACCGG GCTGTTTGAA CGGTCGGGGC GCGGCGTGCT GCTGACGGTG
GCCGGGCGCG CCTTGATCGC CCATGCGGAA AAAATCATTG CCTGTTATGA GCAGATGCGC
GAAGGCCTGG AAGAAGAAAA CGAGATCGCC GGCACGGTGA CCGTGGGTTC GACGGTTTCG
GCCATGGGCC TGCTGTCCAA CACGGTGGTC GCCATGAAGC CGCGGTTTCC CCGCCTGAAT
GTGCGCCTGG TGGTGCAGGA GTCCAGCGGT CTGGCCCAGA GTGTCATCAG TGGGGCGCTG
GATGCCGCGG TCATGATCGA AGGCCCCCCG ATGGAACGCC AGGGCTTGCT GTGGACGCCG
CTGTATGTGG AGCCCTTGAC CCTGGTGGCC AGTTCGCTGG TAGCCGGGCC CGACAGCGAC
ATCAAGAAGC TGCTGCGTGA AAACCCGTTT TTGCGTTTTG ATCGCCGCAC CCCCAGCGGT
ATCCGTATCG AGCAGACCTT GCGCAAACTG GGCCTGATGC CGCAGGACTT TCTGGAGCTG
AGTTCGGTGT CCAGCATCAT CGATCTGGTG CGCCAGAATG TCGGCGTCAC CGTCGTGCCG
CATTGGAGAA ATGCCGACTG GGTGAACGAC CCCACATTGC GCGTCCTGTC GCTACCGGGC
CGTCCGGCGA CACGGCAGAT CGGCATGCTT GAGCATGGGA AGCGTGAACA CATTACGTCC
GTGATCCGTC AACATCTGGT GAGTCTTCTT GCGAAGAAGG CGCCTCCCCA GTTAAAAAAT
TGA
|
|---|
| Protein sequence | MSTIRFLRTF LAVAQEGSFA GASERVALTQ AAVGLQMRAL EAELKTGLFE RSGRGVLLTV
AGRALIAHAE KIIACYEQMR EGLEEENEIA GTVTVGSTVS AMGLLSNTVV AMKPRFPRLN
VRLVVQESSG LAQSVISGAL DAAVMIEGPP MERQGLLWTP LYVEPLTLVA SSLVAGPDSD
IKKLLRENPF LRFDRRTPSG IRIEQTLRKL GLMPQDFLEL SSVSSIIDLV RQNVGVTVVP
HWRNADWVND PTLRVLSLPG RPATRQIGML EHGKREHITS VIRQHLVSLL AKKAPPQLKN
|
|---|
| |