Gene Bpro_1441 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_1441 
Symbol 
ID4011316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp1489773 
End bp1490456 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content62% 
IMG OID637941120 
ProductXRE family transcriptional regulator 
Protein accessionYP_548287 
Protein GI91787335 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0636175 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCCAG ACACGAATCC CCATCCATCC TCATCTGCCG ACGCCGCAGC CGAGCGAACC 
AACTCATGGA AGACCGCGCC CACACCTTCC GCGCAGCGCA TCAACTCCGT GATCGACCTT
TGGCTGGGAG AGCAAGTGCG CCATCGCCGA AAAGCGCTCG GACTCCCATT GCAACAGGTT
GCGCTGGGTT GCGGCATCTC TGTCAGCCTG CTCAGCCAGA TTGAACGCGG GTTACGTTCC
ATTTCACTCC GAACGCTTGC TGCCCTGTCG AACGAGCTGC AATTACCACT GGAAACGTTG
ATCAGGAACA CGCAGCACGA CCAGAACGAA GGCGCGTCGG AGCGCTCTGT GGTGCGCGCC
GGCAAGCATC AGCGCATCGA CCTGGGCGAC AAGGGCATCC ATAAAGAGAA ACTAACGCCA
CCGGCGTCGA CCGGCGGCGT CGAGCTGTAC CGGGCCGTCA TCGACCCCAA GGGCTCCACG
GGCGATGCGC TGTTTTTTAC CCATAAAGGC GAACAGGTGG GCTATGTGGT CGAAGGCCAG
CTCGAACTGT TCATCCAGGA CCGTCTTTAC CGGCTGCAGG CCGGCGACAG CTTTTGCTAC
GACGGTGTCA CACCGCGCCG CTGGCGCAAT CCCGGCCCGT CGATCACGAC GGTGCTTTGG
GCCATCACCG GCACGCTCAG GTAG
 
Protein sequence
MPPDTNPHPS SSADAAAERT NSWKTAPTPS AQRINSVIDL WLGEQVRHRR KALGLPLQQV 
ALGCGISVSL LSQIERGLRS ISLRTLAALS NELQLPLETL IRNTQHDQNE GASERSVVRA
GKHQRIDLGD KGIHKEKLTP PASTGGVELY RAVIDPKGST GDALFFTHKG EQVGYVVEGQ
LELFIQDRLY RLQAGDSFCY DGVTPRRWRN PGPSITTVLW AITGTLR