| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1437 |
|---|
| Symbol | |
|---|
| ID | 4011312 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 1486162 |
|---|
| End bp | 1487457 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637941116 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_548283 |
|---|
| Protein GI | 91787331 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.218696 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCACAGG AATTCTTTCC CCTCAGTCCG TCCCTGTGGG CCGCCACGGC GGCGCCCGCG
CCCGAAACCA CCCCGCTGCA AAGCGATGCG AAAGCCGATG TGGTCGTCAT CGGCGCGGGC
TACTGCGGCT TGAGCACGGC ACTGCACCTG GCCGAGCGCG GCGTGCGCGT CGTGGTGCTC
GAAGCGCGCG ACATCGGCTT CGGCGGCTCT GGCCGCAACG GCGGACAGGT GATTCCGGGC
ATGAAGTTCG ACCCGAGCGA GCTGATGAAA ATGTTCGGAC GCGAGAAAGG GCAGCACCTG
GTCGATTTTG CCGCCAGCAC GGTCGATGCG GTGTTCAACC TGATCGACAA GCACCGCATG
GACGTGCCGC ATGTGCGCCG TGGCTGGATT CAGGGCTCGC ACACGCCGGC CGCGCTCAAA
ATGGCCGAGC GGCGCGTGCG CGATTGGGGT GCGCAGGGTG TCGCCGCGCA GTTGCTGGAC
CGGGCTGAGA CGGCCCGCCT GCTGGGCACC GACAAATACC TGGGCGGCTG GATGGACCCA
CGCGGCGGCG GTGTACAGCC GCTGAGCTAC GTGCGCGGCC TGGCGCGCGC TGCGATCGCA
GCGGGCGTGG TCATTCAAAC TGACAGCCCC GCGGCGCAAC TGCTGCAAGA CCAGGGCCAG
TGGCAGGTCG TGACCGCAGG CGGCGCCAGG GTCAGCGCCG AGCGCGTGGT GCTCTGCACC
AACGGTTACA CCGATGGGTT ATGGCCGCAG CTTAGCAAAT CGATCATCAA CGCCAACTCG
TTCCAGGTCG CGACCGAGCC GCTTCCCGAA GCTGTCCGCA GGAGCATCCT GCCTGAAGGA
CATGTCTCTT CCGATGCACG CAACCTCTTG CTCTATTACC GAATTGACCA CAGCGGCCGT
TTGTTGATGG GAGGACGCGG AACCTTTAGG GAGCCCGATC CAGCCCTGCC CGGCAACTGG
TCGCATCTGC AGAACGTGAT CGGCAAGCTG TTCCCGCAGG CGGCCGGGAT GCCGATTGCT
TACCGCTGGT GCGGGCATGT CGCCATCACG CGCGACTACC TGCCGCACCT GCATGAGCCC
GCGCCGGGCT TGCTGATCGA CATCGGCTGC CAGGGGCGCG GCGTCGGCCT GCAGACGCGC
ATGGGGCAGG CACTGGCCGA GTACATCGCC ACCGGCGACA AACAGGCACT GCCCGTCGCG
CCATCGACGA TCAAGCCATT TCCGCTGTAC GGGTTGAGGC GCCTGTACGT CTCGGCGGTA
ATCGGATGGT ACCGAATGAC CGACGGCGGC GTTTAG
|
|---|
| Protein sequence | MSQEFFPLSP SLWAATAAPA PETTPLQSDA KADVVVIGAG YCGLSTALHL AERGVRVVVL
EARDIGFGGS GRNGGQVIPG MKFDPSELMK MFGREKGQHL VDFAASTVDA VFNLIDKHRM
DVPHVRRGWI QGSHTPAALK MAERRVRDWG AQGVAAQLLD RAETARLLGT DKYLGGWMDP
RGGGVQPLSY VRGLARAAIA AGVVIQTDSP AAQLLQDQGQ WQVVTAGGAR VSAERVVLCT
NGYTDGLWPQ LSKSIINANS FQVATEPLPE AVRRSILPEG HVSSDARNLL LYYRIDHSGR
LLMGGRGTFR EPDPALPGNW SHLQNVIGKL FPQAAGMPIA YRWCGHVAIT RDYLPHLHEP
APGLLIDIGC QGRGVGLQTR MGQALAEYIA TGDKQALPVA PSTIKPFPLY GLRRLYVSAV
IGWYRMTDGG V
|
|---|
| |