| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1397 |
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| Symbol | |
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| ID | 4011777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 1435857 |
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| End bp | 1436549 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637941077 |
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| Product | ABC transporter related |
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| Protein accession | YP_548244 |
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| Protein GI | 91787292 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | [TIGR03410] urea ABC transporter, ATP-binding protein UrtE |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.427343 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.549514 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGACAG TCAAAAACAT CAACCAATAC TACGGCGGCT CCCACATCCT GCGCGATGTG
AGCATGGACT CTCACCTCGG CAAGGTCACG GTGCTGCTGG GCCGCAACGG CGTAGGCAAG
ACCACGCTGC TCAAGTCGCT CATGGGCCTG GTGCCGATCA AGACCGGCAC CATTGAATTT
GACGGCAAGC AGATCCAGGG CGCGACACCG TATGAACGCG CAAGGGCCGG CATAGGCTTC
GTCCCCCAGG GCCGCGAAAT CTTTGCGCGC CTGACGGTGG AAGAAAACCT GCGCATGGGT
CTGGCTTACA AAAGCGCGGG CACACCGATT CCTGCCGAAC TGTATGAACT GTTCCCCGTG
CTCAAGCAGA TGCTGAACCG CCGTGGCGGC GACCTCTCGG GCGGGCAGCA GCAGCAGTTG
GCGATTGCAC GCGCGCTGGC CGCTAGCCCC AAGCTGCTGA TCCTGGACGA GCCGACCGAG
GGCATACAGC CGAGCATCAT CAAGGACATC GGCCGCGTGA TCCGCATGCT GGCCGACCGG
GGCGGCATGG CGATTCTGTT GGTGGAACAG TACTACGACT TTGCGCAGGA CCTGGCTGAC
GACTACCTGG TGATGGAGCG CGGCGAGTTC ATCGCGCGCG GCCAGGGCAA GGACATGGAA
GCCAACGGTG TGCGGCAGCT GGTGGCGATA TGA
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| Protein sequence | MLTVKNINQY YGGSHILRDV SMDSHLGKVT VLLGRNGVGK TTLLKSLMGL VPIKTGTIEF
DGKQIQGATP YERARAGIGF VPQGREIFAR LTVEENLRMG LAYKSAGTPI PAELYELFPV
LKQMLNRRGG DLSGGQQQQL AIARALAASP KLLILDEPTE GIQPSIIKDI GRVIRMLADR
GGMAILLVEQ YYDFAQDLAD DYLVMERGEF IARGQGKDME ANGVRQLVAI
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