| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1394 |
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| Symbol | |
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| ID | 4011908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 1431534 |
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| End bp | 1433108 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637941074 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_548241 |
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| Protein GI | 91787289 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | [TIGR03409] urea ABC transporter, permease protein UrtB |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.22997 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.640869 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGATTC GCTTCTCATT TTTATTCGCT ACGTTTTTAA TAGCTGCCAG CGCCCATGCC
TTGAGCCTGG ACGAGGTCAA AGGCATGGCC ATCGGGGAGA CCGAAAGCCG TGTCGAAGCG
CTGAACAAGG CGGCTGTGGC GGCGGACGAG AAAACCGCCG CCTTCATCCA GGCCATGGCC
GACGATGCCG TCAAAACTGC CGGCGACAAG GTGTTTGTGA TCAAGGACGA CAAAGGCTTC
GACCCGGTCA CCGGCGCCGA GCTGGCCCTG CCGGCCGACG CCGAAGACGT GATTAACAAC
AACATGATGC GCGGCGAGCT GGACACGGCG TTGGCCGCGC TGAAGCTGTT CTCCAAAGAA
GAGAACGTGC GCCGCGATGC CATCAAGACC CTTTCGGGCG GCAGCGACGA AGCCCGCTTG
CCGCTGATTG AAAAAGCCTA TGCGGCCGAA ACTGTGCCGG CGCTGAAAAG CCAGCTGGAG
CTGGTGCGCG CCGCCATCCT GCTGGGCAGC ACGGACAGGG CCAAACGCCT GGAAGCCGCG
GCGCAGCTTG CCACCAGCAA CAACCCCAAC ACCAAGACCG TGCTGATCGA ACGCCTGGGC
AGCGAGGAAG ATGCCGACGT CAAGGTGGCG CTGCAGGCCG CGCTGGCCAA GGTGGAGGCT
TCACTGGCCT GGGGCGACAA GCTGGGCGCG ATTTTCAGCG GCATCAGCCT GGGCAGCATT
TTGCTGCTGG TGGCGCTGGG CCTGGCGATC ACCTATGGCC TCATGGGCGT CATCAACATG
GCGCACGGCG AGCTGATGAT GATTGGCGCC TACGCCACCT ACGTGGTGCA GGGCCTGTTC
CAGAAGTATT TGCCCGGCGC GTTTGACTGG TACCTGCTGG CCGCCGTGCC GGTGGCCTTC
CTGGCGTCGG CGCTGATGGG CGCGGCGCTG GAGCGCAGCG TGATCCGCTT CCTGTATGGC
CGCCCGCTCG AAACATTGCT GGCCACCTGG GGTATCAGCC TGATGCTGCA GCAGCTGGTG
CGCTCCATCT TCGGCGCGCA AAACGTCGGC GTGGAAAACC CGGTGTGGAT GAGCGGCGGC
GTGCAGGTGC TGGGCAATCT CTCGCTGCCC TACAACCGGC TGGTCATCAT CGGCTTTGCC
ATTGCCGTGC TGCTGGGCAT GGCCTGGCTG ATCAGCAGGA CGCGGCTGGG CCTGTTTGTG
CGCGGCGTCA CGCAAAACCG GCCCATTGCC TCGTGCATGG GCGTGAACAC GGCACGGGTG
GACACCTACG CGTTTGCGCT GGGATCGGGC ATTGCCGGGC TGGCGGGCTG CGCGCTGAGC
CAGGTCGGCA ATGTGGGGCC GGACCTGGGG CAGGGCTATA TCGTGGATTC GTTCATGGTG
GTGGTGCTGG GCGGCGTGGG CCAGCTGGCC GGCACGGTGT ATGCCGCGAT GGGCCTGGGC
ATCCTGAATA AATTCCTCGA AGGCTGGACG GGCGCGGTGC TGGCCAAGAT TGCCGTGCTG
GTGTTCATCA TCATCTTCAT CCAGAAGCGG CCGCAGGGCA TCTTTGCGAT GAAGGGCCGG
AGTGCCGAGG CATGA
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| Protein sequence | MMIRFSFLFA TFLIAASAHA LSLDEVKGMA IGETESRVEA LNKAAVAADE KTAAFIQAMA
DDAVKTAGDK VFVIKDDKGF DPVTGAELAL PADAEDVINN NMMRGELDTA LAALKLFSKE
ENVRRDAIKT LSGGSDEARL PLIEKAYAAE TVPALKSQLE LVRAAILLGS TDRAKRLEAA
AQLATSNNPN TKTVLIERLG SEEDADVKVA LQAALAKVEA SLAWGDKLGA IFSGISLGSI
LLLVALGLAI TYGLMGVINM AHGELMMIGA YATYVVQGLF QKYLPGAFDW YLLAAVPVAF
LASALMGAAL ERSVIRFLYG RPLETLLATW GISLMLQQLV RSIFGAQNVG VENPVWMSGG
VQVLGNLSLP YNRLVIIGFA IAVLLGMAWL ISRTRLGLFV RGVTQNRPIA SCMGVNTARV
DTYAFALGSG IAGLAGCALS QVGNVGPDLG QGYIVDSFMV VVLGGVGQLA GTVYAAMGLG
ILNKFLEGWT GAVLAKIAVL VFIIIFIQKR PQGIFAMKGR SAEA
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