| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1388 |
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| Symbol | |
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| ID | 4011902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 1425239 |
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| End bp | 1425925 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637941068 |
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| Product | amino acid ABC transporter permease |
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| Protein accession | YP_548235 |
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| Protein GI | 91787283 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.527721 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.839592 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACAGCA TTCTTTCAGT GTTCTACCAA TACTGGCCCG AGTGGGGTCC TCGCCTCGCC
GAAGCGGCAA AGGTTACTGC CAAGTTGTCA TCCGCAGGCT TCGCGATTGC CTTGCTCCTG
GGCGCGATCC TGGTCGCCAT GATCCGCAGC GGCCGGCCAG CCCTGCGCTT TGCAGCGAAC
TTCTTCATCC AGTTCGTACG CACCGTGCCC TTGCTCGCGC TGCTGCTGGC GCTCTACTTT
GCACTGCCGC CGCTCGGGAT CACACTGCCG GGCTTTTGGG CTGGGATTAT CGGGTTGGGT
CTCCACGGCG CTGCTTACGT TGCCGAGATT TTGCGCGGGG GCCTGCAGTC CATTCACCGC
GGGCAGCGCG AAGCAGCCCT GGCTGTTGGC CTGGCGCCTC ACCAGGTCTT TATGCATGTG
GTGTTTCCCC AGGCTCTGCG CGTGATGCTT CCTCCGTTGC TAAACACCTA TGTGGCGCTT
TTAAAAGACA GCTCACTCTG CGCACTGATT GCTACGGACG AGCTGATGCT CACGGCACGG
GCCATGTCCA GCGAGTTCTT CCTGCCCCTG CACATATTCC TGCTGGTGGG CGCCTTCTAC
TTTGCAATTG CTTTTCCCCT GTCAATGGTT TCGCGAGCGC TTGAGAAGCA CCTCTCGCGT
GGCCGAAGGG TAATGGGTTC GACATGA
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| Protein sequence | MNSILSVFYQ YWPEWGPRLA EAAKVTAKLS SAGFAIALLL GAILVAMIRS GRPALRFAAN
FFIQFVRTVP LLALLLALYF ALPPLGITLP GFWAGIIGLG LHGAAYVAEI LRGGLQSIHR
GQREAALAVG LAPHQVFMHV VFPQALRVML PPLLNTYVAL LKDSSLCALI ATDELMLTAR
AMSSEFFLPL HIFLLVGAFY FAIAFPLSMV SRALEKHLSR GRRVMGST
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