Gene Bpro_1387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_1387 
Symbol 
ID4011901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp1423839 
End bp1425242 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content60% 
IMG OID637941067 
Productaspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A 
Protein accessionYP_548234 
Protein GI91787282 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.593725 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.886782 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATA AATCTCTTAC TTACGCCTCC ATAGAGGAGA CCCTCGAAGC TTTGACCAGC 
GGAGCGATCA ACAGCGAAGC ATTGGTCGAA AATCACTTGT CGCGCATAGA GACCTTTGAT
GTCAAGCTGC ACGCTTACGT AGACCTCTAT GCTGAAGAGG CCTTGCAGGC CGCCCGCGGA
CTGGACAAGC TCAGGCAAGC CGGCCTCACG GTCGGCCCGC TTCACGGTGT GACCATCGCC
GTCAAAGACC TTTTTGAAAT CAAGGGGCAT GCCATCACCG CGGGGTCCAA ATCGCTCCCG
CCACGAACCT CCTCCATCAC GGCGACGGTG GTCGACCGTT TGAGAGCGGC CGGCGCGATC
GTCCTGGGAA AGACGCACAC GGTGGAATTC GCTTTTGGCG GCTGGGGAAC CAACACCTCC
ATGGGGACGC CCTGGAACCC CTGGGACCTT GCGATCCACC GCGTTCCTGG CGGCTCCAGC
AGCGGCTCCG CAGTTGCGGT CTCAGCGGGC ATGGCCTGCG CCGCACTTGG AACGGACACC
GGTGGATCCG TTCGCATCCC GGCCGGGCTC TGCGGGCTTG TGGGGCTGAA GACGACGCAT
GGCCTGATCA GCAGATATGG CCTGATTGAC CTATGCCCCA CACATGACAC GGTCGGCCCC
ATCACACGAA CCGTGAGGGA TTGCGCGACG CTGCTTGACG TCCTGGCGGG GCCCGATCCG
CAAGACGTAG CGTCCCGCTT TTCTCCTTCG CGTTCGGTCT CGAAAGGGCT TGAGAAAGAT
GTCAGGGGAA TGAGGGTTTG GACCCTTCCC AAGGCTGAAC GCGTGGAAGT GGACCCGGAA
GTCCTGAAGG CCTACGACAG GTCCCTTTCT GTATTCCTTG AGCTTGGCAT GACCCTGGTG
GACAAGCCAC TTCCACAAAG CCTCACCCAA TCCATGCGCA TCGCGGGCAG CCTGATGAGC
GCCGAAGGCT ATGCGAATCT CGGCACGCTT TTCGAGCGCA GCGAACTGGA GTTCGACCCG
AACATCAAGC GGCGGATCAT GCTGGGCCGC GATATCGGCG CCGCTCAATA CATCGACCTT
CTCCGGGACC GTGAGTCCGC GAAGGCCGCG ATGCTGGAAG CCATGGACGG CGTGGATGTC
TGCGTATTTC CGACCAACGC GATCACCGCA ATTCCGGTAA GTGAGGTCGA CGAACTCGCC
ACGCCGCTGT CGAGATTTGG CCGTTTTGTG AACCTACTTG ATTTGTGTTC GGTTGCAATT
CCTGCAGGAC TTTCCGCCAA CGGCCTCCCG GTCTCCATCC AGGTTATTGG GCGCCCGTTT
GCAGAGCCAA CGATATTGAG GGCGGCGTTC GCCTTCGAGA AAGCAACGTC GTGGAACCAA
TCATTTCCCG CCGGTCTTGA CTGA
 
Protein sequence
MTDKSLTYAS IEETLEALTS GAINSEALVE NHLSRIETFD VKLHAYVDLY AEEALQAARG 
LDKLRQAGLT VGPLHGVTIA VKDLFEIKGH AITAGSKSLP PRTSSITATV VDRLRAAGAI
VLGKTHTVEF AFGGWGTNTS MGTPWNPWDL AIHRVPGGSS SGSAVAVSAG MACAALGTDT
GGSVRIPAGL CGLVGLKTTH GLISRYGLID LCPTHDTVGP ITRTVRDCAT LLDVLAGPDP
QDVASRFSPS RSVSKGLEKD VRGMRVWTLP KAERVEVDPE VLKAYDRSLS VFLELGMTLV
DKPLPQSLTQ SMRIAGSLMS AEGYANLGTL FERSELEFDP NIKRRIMLGR DIGAAQYIDL
LRDRESAKAA MLEAMDGVDV CVFPTNAITA IPVSEVDELA TPLSRFGRFV NLLDLCSVAI
PAGLSANGLP VSIQVIGRPF AEPTILRAAF AFEKATSWNQ SFPAGLD