| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1385 |
|---|
| Symbol | |
|---|
| ID | 4011899 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 1421357 |
|---|
| End bp | 1422562 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637941065 |
|---|
| Product | D-amino-acid dehydrogenase |
|---|
| Protein accession | YP_548232 |
|---|
| Protein GI | 91787280 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.71736 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTCT GCGTTATCGG CGCCGGCATC GTGGGCTGCT CGACGGCCTA TCAATTGGCC
CGCATGGGGC ATGAGGTGCA CCTCGTGGAT GAGGCCGCCG GTCCGGGCCT GGGAACGAGC
AACGCCAACG GGGCCCAGCT CAGCTACAGC TATGTGGAGC CACTGGCCTC ACCGCACACC
CTGGGCGGAC TTCCCGGCAT GTTGCTTTCA CGCGGGTCGC CCCTTCGGTT CCGGCCCAGG
CTGGATTGGA GGCAGTGGTA CTGGGGCTTC CAGTTTCTCA AGGCATGCAC CGCAAAACAG
GTTGAAAGCG GGACCCGAAC ACTGCTGCAG CTATCGCAGC TCAGCCGCGA CACGCTGATG
AGATGGATGG AAAGCGAGGA TTGGTCGTTT GATTACAAAA TCAACGGGAA GCTGGTCCTT
TGCCCCACCC GGGACTGCCT GAAACGCCAG GAAGCGCAGA TCAAATTCCA AAGCCAGTTC
GGATGCCATC AGAAAATTCT GGGCGTGCGG GAATGCGTTG AAAAAGAACC CTCATTGCAA
AGCTACTCCG GGAAATTCGC CGGCGGCGTG TGGACTGCCG AAGAGCGGGT GGCCGACCCT
TACAAGCTCT GCCAGGAGCT GCTCCGAAGC TTGGTGCGCA TGGGTGCGAA TGTTTCGTTC
AATGCCAGGG TGAATGACTT TGTCACTTCG GGTGAGCGTC TGGATACCGT TCGCACCAGC
AAAGGCGACC TGAGGTCCGA CGCCTTCGTG CTGGCCACCG GCGTGACGGC CCCAGCTCAT
GCGTCGAAAC TCGGTATTTA CCTTCCTGTT TACCCCCTCA AGGGCTACAG CATCACGCTG
CCGATCAAGG GTGGGCGCCA GGCGCCAAAA GCCAGCGTCA CGGATCTTTC TCTCAAGACA
GTTTTTGCTC CCCTCGCACA AAACCTGAGA GTGGCCGCGA TGGCCGAGAT CGGCGGCCAT
GATCTTTCCA TTCCGGGTGA CCGCATCAAG CAAATGGTGG CGTCGGTTGA ATCTGTTTTT
CCTGGCCTAT GCGATTTGTC GTCCACTCGC CCCTGGGCGG GTTTACGGCC TGCCACGCCG
ACCTCCGTCC CAATCGTAGG GCGCTCCAGG TTCAAAAATC TGTTCTTGAA TGTTGGGCAT
GGTGCACTCG GGCTAACGCT CGCGGCAGGC AGTGCGGTAG CTATATCTCA AGAAATTTCG
TCATGA
|
|---|
| Protein sequence | MKVCVIGAGI VGCSTAYQLA RMGHEVHLVD EAAGPGLGTS NANGAQLSYS YVEPLASPHT
LGGLPGMLLS RGSPLRFRPR LDWRQWYWGF QFLKACTAKQ VESGTRTLLQ LSQLSRDTLM
RWMESEDWSF DYKINGKLVL CPTRDCLKRQ EAQIKFQSQF GCHQKILGVR ECVEKEPSLQ
SYSGKFAGGV WTAEERVADP YKLCQELLRS LVRMGANVSF NARVNDFVTS GERLDTVRTS
KGDLRSDAFV LATGVTAPAH ASKLGIYLPV YPLKGYSITL PIKGGRQAPK ASVTDLSLKT
VFAPLAQNLR VAAMAEIGGH DLSIPGDRIK QMVASVESVF PGLCDLSSTR PWAGLRPATP
TSVPIVGRSR FKNLFLNVGH GALGLTLAAG SAVAISQEIS S
|
|---|
| |