| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1371 |
|---|
| Symbol | |
|---|
| ID | 4012020 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 1411329 |
|---|
| End bp | 1412057 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637941051 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_548218 |
|---|
| Protein GI | 91787266 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.197598 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCACACG CCGTTTCACA CCAGAAAGAT TTTGAGGCGG CGCACCAGCT GCGCAGCGAC
CTCGCCCTGG CCTTGCGCGC CGCCGCGCGG CATGGGCTGG CCGAAGGTGT CTGCAACCAC
TTCAGCGTGG AGTTGCCGGA CGGCTCGGGC CGCTTTCTGC TGAACCCGCG TGGCCTGCTC
TGGAGCGAGA TCGGCGCGGA CGACATCGTG ATGATTGACG TGCAAGGCAA CAAGCTGGCG
GGCCATCGTG AGGTGGAGCC CACGGCCATG TTTATCCACG GTGCGATTCA TGGCCATGCC
CGCAAGGCCT GCGTGCTGCA CACTCACATG CCTTACGCCA CGGCCCTGAC GCTCACGGCC
GACCGCGGAC TGGACACCAC GCTGTCGCAA AACGCGATGC GCTTTCACGG CCGGGTGGCC
ATTGACGCGG ACTACAACGG CCTGGCGCTG GACGCCACCG AGGGCCTGCG CATTGCCAAG
GCGATGCAGG GGGCGGACGT GGTGTTTCTG GGCAACCATG GCGTGGTGGT TTGCGGCGCG
CGCATGGACC ATGCGTATGA CGACCTCTAC TACCTGGAGC GGGCCTGCAT GGTGCAGGTG
CTGGCACAGT CCACCGGCCG GCCCCTCGTG CCGGTCGATG CGGCGATTGT CGAGCGCGTG
GCCGGGGAAA CCATGGGTGA GCGTTTGCAA TCGGAGCTTT TCTTTGACGC GCTGCGCCGC
ACGCTTTGA
|
|---|
| Protein sequence | MPHAVSHQKD FEAAHQLRSD LALALRAAAR HGLAEGVCNH FSVELPDGSG RFLLNPRGLL
WSEIGADDIV MIDVQGNKLA GHREVEPTAM FIHGAIHGHA RKACVLHTHM PYATALTLTA
DRGLDTTLSQ NAMRFHGRVA IDADYNGLAL DATEGLRIAK AMQGADVVFL GNHGVVVCGA
RMDHAYDDLY YLERACMVQV LAQSTGRPLV PVDAAIVERV AGETMGERLQ SELFFDALRR
TL
|
|---|
| |