| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1353 |
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| Symbol | |
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| ID | 4011964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 1390190 |
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| End bp | 1393783 |
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| Gene Length | 3594 bp |
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| Protein Length | 1197 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637941033 |
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| Product | periplasmic sensor hybrid histidine kinase |
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| Protein accession | YP_548200 |
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| Protein GI | 91787248 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACAGA ACCTGCACGC AAAACAGGTC ACCACTTCGC CGCCAACCCC CCCCATGGAC
GCCCCGGTCA TGCCTTCGCC GCTGCCAGCC CGACCCGATG CGCCCCCGGC ATCGCCGGAC
GCGCGCGCCA GGCCCGAGGT GGCGGTGCAG CGCATCATCA AGGTCCGGCG CGACTACAAC
AGCTGGGTCG CCAGCGAGAC CATGGAGGAC TATGCACTGC GCTTTACCCC CCAGCGTTTT
CGCAAATGGT CGGAGTTCCG GGTGGCCAAC ACGGCGTTTG GCGCGGCCTC CTTCCTGATC
CTGGAGGCCG TGGGCGCCAC CCTGCTGGTG AAATACGGCT TTACCAATGC CTTCTGGGCG
ATTGTGGCCA CCGGGCTGAT TATTTTCCTG GCGGGGCTGC CCATCAGCAT TTACGCCGCC
CGCTATGGGG TTGACATGGA TTTGCTGACC CGCGGCGCGG GTTTTGGCTA TATCGGCTCC
ACGCTCACCT CGCTGATCTA CGCGTCATTC ACCTTCATTT TCTTCGCGCT CGAGGCGGCC
GTCATGGCCT ACGCGCTGGA TCTGGCCCTG GGCATACCGC CCAGCTGGGG TTACCTGATC
TGTGCGCTGG TGGTGATCCC GCTGGTCACC CACGGGGTAT CGGCCATCAG CCGCCTGCAG
GTCTGGACGC AACCTTTGTG GATCGTGATG CTGGTGGTCC CCTTCATCTA CGTATTGCTG
CGCAATCCTG GTGCTTTTTC GGGTGTTCTG CACTATGGAG GTGAGCGGGG CGTAGGTGGC
GAATTTAATT TGCACCTGTT TGGTGCTGCT TTGACGGTGG GCATTGCGCT GATCACGCAA
ATGGGCGAGC AGGCAGACTA CCTGCGCTTC ATGCCGGTGC AGACCCGGGC CAATCGCTGG
CGCTGGTGGG GTGGGGTGCT CGTCGGCGGG CCTGGCTGGG TTGTGCTGGG GGTGGTCAAG
ATGCTGGGCG GCGCCCTGTT GGCCTACCTG GCCATTACCA ACATGGTGCC GCCCGACCGC
GCCGTTGACC CCAACCAGAT GTACCTGGCG GCCTATGAGT ATGTGTTTCC TGATTACGGC
CTGGCGGTGG CGGCCACGGC ATTGTTCGTG GTGATCTCGC AGCTCAAGAT CAACGTCACC
AACGCCTATG CCGGCTCACT GGCCTGGTCC AACTTCTTCT CGCGCCTGAC GCACAGCCAC
CCCGGTCGCG TGGTGTGGGT GGTGTTCAAC ACGCTGATCG CCTTCATGCT GATGGAGATG
AATGTGTTCC AGGCGCTGGG CGACGTGCTG GGCCTGTATT CCAACATTGC CATTGCCTGG
GTGATGGCCG TGGTGGCCGA CCTGGTGATC AACAAGCCGC TGGGCCTGTC GCCGCGGGGC
ATCGAATTCA AGCGTGCGCA CCTTTACGAC ATCAACCCGG TGGGCGTGGG CGCGATGGCG
CTCGCTTCCC TGTTGTCCGT GGCGGCTTAC CTTGGGTTGT ATGGCGAACT GGCGCGGGCT
TTTTCGGCGG TGATCGCCAT GGGGACCGCC TTTGTGACGG CGCCCCTGAT TGCCTGGGCG
ACCAGGGGCC GCTACTACAT TGCCCGCAGT TCCGGAACGT CGGAGGCCGA CGCGTCGTAC
CAGCGCTATG CGACGCAGCA GTGCGTGATC TGCGAGCGCG CTTATGAAGG CCCCGACATG
GCGCATTGTC CGGCTTACCA GGGCCCGATC TGCTCGCTGT GCTGCACCCT GGACGCGCGC
TGCGGCGATT TGTGCAAGCC GCAGGCAAGC CTGTCGGCGC AATGGTCGGC GGCCCTGCGC
TGGCTGCTGC CGCACCGAAT CTGGCCTTAT CTTGACACCG GGCTGGGCCA CTTCCTGTTG
CTGATGCTGA TCATCGTGCC GCTGCTGGCC AGCGTGTTCG GGCTCCTCTA CCACCAGGAG
ATGGGGGCAC TCGGCGACTT CATGCTGTCC GGGTCGGCCC TGCGCTCGGG TTTTTTGAAG
GCCTACATGG CGCTGCTGGT CATCGCCGGG CTGGTTGCCT GGTGGCTGGT ACTGGCGCAC
AAGAGCCGGC AGGTCGCGCA GGAAGAGTCC AACCGGCAGA CCCATTTGCT GATGCGCGAG
ATCGAGCTGC ACCGCCAGAC CGATGAAGCC CTGCAACTGG CCAAGCTGCA TGCCGAGCAC
GCCAGGCACG CGGCCGACCA GGCCAACCAG GCCAAGAGCC GCTACATCAG CGCCATCAGC
CATGAGCTGC GCACGCCGCT CAACAGCATT CTGGGCTATG CCCAGCTGAT GGGTGAAGAC
GCCGCGATAC CGCCGCACCG CAAGCAGGCG GTCAGTGTGA TCCGGCGCGG CGGCGAGCAT
CTGCTGTCGC TGATTGAAGG CACGCTGGAC ATTGCCCGCA TCGAGGCGGG CAAGCTCACG
CTCACGGTCA AGCCCATGCA GTTTGCCGAT TGCGTGCATG AAATGGCGGG GATGTTCGAG
CTGCAGGCCG CCGCCAAGGG CCTGGGCTTC CGGTTTGAGA CCGCCGGCAA CCTGCCCGAG
CTGGTGCGTG CTGACGAAAA ACGGGTCCGC CAGATCCTGA TCAACCTGCT GGGCAACGCC
ATCAAGTTCA CCGCCCAGGG GCAGGTGATC TTCAGGTTGC GCCATGCGCG CGAGATGGCC
TACATCGACA TTGAAGACAC CGGCCCGGGC ATGAGCGAAG CGGAACTGGC GCAGATTTTT
GAGCCCTTTG CGCGGGGCGC CGCGGCCGGC CACAGTGCGG AAGGCACGCC CGGCGCCGGC
CTGGGCCTGA CCATCGCCAA AATGCTGACC GACCTGATGG GTGGCGAGAT GACGGTGCTC
AGCACGCCGG GCCAGGGGTC GGTGTTCCGC GTCCGGCTGT TTTTGCCGGA AGTGCATGTG
ACGGCCGGCG CCGGCAAGAG CACGCTCGCC GCACCGGCCA GGCGCCAGCC ACGCGGCTAC
GAGGGCGTGC GCCGCAAGCT GCTGGTGGTG GACAACGAGG AGCCCGACCG TGAGTTGCTG
GTGCAACTGC TCGAACCCAT GGGCTTTGAT TTGCGCACCG CGGCCAGCGG CCATGATTGC
CTGGACCTGC TGGCCGCCGG TTACCAGCCG GATGTCATTT TCATGGACCT GGCCATGCCG
GGCATCGATG GCTGGGAAAC CCTGCGCCGC GTGCGCAGTG CCGGGCATAC CGGCACCCAT
CTGGCGATCG TGTCGGCCAA TGCGTTCGAC AAGGGGCTGG ACAACGATGT CGGCATCCCC
CCGGAGGATT TCATTTTGAA GCCTGTGCGC CACACCGAGT TGATCGACTG GCTGGAGCGG
CGGCTCGGCT TGCGCTGGTG TTATGAGGCG CAGGCGGATG CGGGCCAGCT GCCTGCGCCG
GCGGCGCCGC CACCGCGCGT CCTGCCCGAT GCGCCGCAGC TGGCAGCCTT GCTGGAAGTG
GTCACGCTCG GGTTCTACCG CGGCATCATG AACAAGCTGG CGGAGATTGA AACGCAACAA
CCCGCTACCG CCGCCTTCGT CGAGGACATG CGGGCGCTGG CGCGGCAGTT CCAGTTCGAA
GCCATGGGCC GGCAGCTCAC CAACCAGGAG GCCGCCCATG AGCAGCGTGC TTGA
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| Protein sequence | MAQNLHAKQV TTSPPTPPMD APVMPSPLPA RPDAPPASPD ARARPEVAVQ RIIKVRRDYN
SWVASETMED YALRFTPQRF RKWSEFRVAN TAFGAASFLI LEAVGATLLV KYGFTNAFWA
IVATGLIIFL AGLPISIYAA RYGVDMDLLT RGAGFGYIGS TLTSLIYASF TFIFFALEAA
VMAYALDLAL GIPPSWGYLI CALVVIPLVT HGVSAISRLQ VWTQPLWIVM LVVPFIYVLL
RNPGAFSGVL HYGGERGVGG EFNLHLFGAA LTVGIALITQ MGEQADYLRF MPVQTRANRW
RWWGGVLVGG PGWVVLGVVK MLGGALLAYL AITNMVPPDR AVDPNQMYLA AYEYVFPDYG
LAVAATALFV VISQLKINVT NAYAGSLAWS NFFSRLTHSH PGRVVWVVFN TLIAFMLMEM
NVFQALGDVL GLYSNIAIAW VMAVVADLVI NKPLGLSPRG IEFKRAHLYD INPVGVGAMA
LASLLSVAAY LGLYGELARA FSAVIAMGTA FVTAPLIAWA TRGRYYIARS SGTSEADASY
QRYATQQCVI CERAYEGPDM AHCPAYQGPI CSLCCTLDAR CGDLCKPQAS LSAQWSAALR
WLLPHRIWPY LDTGLGHFLL LMLIIVPLLA SVFGLLYHQE MGALGDFMLS GSALRSGFLK
AYMALLVIAG LVAWWLVLAH KSRQVAQEES NRQTHLLMRE IELHRQTDEA LQLAKLHAEH
ARHAADQANQ AKSRYISAIS HELRTPLNSI LGYAQLMGED AAIPPHRKQA VSVIRRGGEH
LLSLIEGTLD IARIEAGKLT LTVKPMQFAD CVHEMAGMFE LQAAAKGLGF RFETAGNLPE
LVRADEKRVR QILINLLGNA IKFTAQGQVI FRLRHAREMA YIDIEDTGPG MSEAELAQIF
EPFARGAAAG HSAEGTPGAG LGLTIAKMLT DLMGGEMTVL STPGQGSVFR VRLFLPEVHV
TAGAGKSTLA APARRQPRGY EGVRRKLLVV DNEEPDRELL VQLLEPMGFD LRTAASGHDC
LDLLAAGYQP DVIFMDLAMP GIDGWETLRR VRSAGHTGTH LAIVSANAFD KGLDNDVGIP
PEDFILKPVR HTELIDWLER RLGLRWCYEA QADAGQLPAP AAPPPRVLPD APQLAALLEV
VTLGFYRGIM NKLAEIETQQ PATAAFVEDM RALARQFQFE AMGRQLTNQE AAHEQRA
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