| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1332 |
|---|
| Symbol | |
|---|
| ID | 4011979 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 1372470 |
|---|
| End bp | 1373042 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637941012 |
|---|
| Product | GreA/GreB family elongation factor |
|---|
| Protein accession | YP_548180 |
|---|
| Protein GI | 91787228 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0782] Transcription elongation factor |
|---|
| TIGRFAM ID | [TIGR01461] transcription elongation factor GreB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.294175 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAAG CTTTCACCCG GGAAACCGAA CAGGACGACG AAGACTTGGC GCTTGCGCCA
CTGCCTGCGG GCGGCAAGAA TTACATCACG CCGGTGGGTT ACGAGCGCCT GCGCGCCGAA
TTGCTCGACC TGATCGACAA CGAACGTCCC AAGGTCGTGG AGATTGTTCA CTGGGCTGCC
AGCAATGGTG ACCGGTCTGA AAACGGGGAC TATCACTACG GTAAAAAACG CCTGCGCGAG
ATTGACCGGC GCATCCGGTT TTTGACGCAA AGGCTGGAAA TCGCCGAGAT CAGCAACCCC
TCCATCCACC ATGGCAGCGA CCAGGTGTTT TTTGGCGCCA CCGTGACTTA TGTCGATGAC
AGGGGCGAGG AGCGTACCGT CACCATTCTG GGGATTGATG AAGCCAACAG CGCCTTGGGG
CAAATCAGCT GGATTTCTCC GGCGGCCAGG GCGCTGCTCA AATCACGGGT GGGTGATGAA
GTGAACCTGG TCACGCCCCA GGGCCTGCAG GTGCTCGAAG TGCTGAAGGT GGACTATCCA
GCGCCCGATG CCCGCGAGGA CCTCAAGCAG TAA
|
|---|
| Protein sequence | MSKAFTRETE QDDEDLALAP LPAGGKNYIT PVGYERLRAE LLDLIDNERP KVVEIVHWAA
SNGDRSENGD YHYGKKRLRE IDRRIRFLTQ RLEIAEISNP SIHHGSDQVF FGATVTYVDD
RGEERTVTIL GIDEANSALG QISWISPAAR ALLKSRVGDE VNLVTPQGLQ VLEVLKVDYP
APDAREDLKQ
|
|---|
| |