Gene Bpro_1330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_1330 
Symbol 
ID4011976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp1369461 
End bp1370885 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content65% 
IMG OID637941009 
Producttype II secretion system protein E 
Protein accessionYP_548178 
Protein GI91787226 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 
TIGRFAM ID[TIGR02533] general secretory pathway protein E 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTACC CATTGCCTTA CGCCTTTGCC CGCAGCAATA CCCTGCTGCT GGAAGACGAT 
GGCCATGCGC TGACGCTGTG GCATCCGGCC CGGCCCGACC CTGCGGCCCT GGGTGAAGTG
ATGCGCAAGT TCGCGGCGCA CAGCCCCGCG CTGGTCCTTC AGTGCGCCGA CGCGGGAACC
TTGACCCAGC GCATCAGCGC CGCCTACGCG GCAGGGGAGT CGAGTGCGGC CGCCGTGGTG
AGCGAGGTGG AGTCCGACGC CGACCTGTCG CGCATCATGC AGGAGTTGCC GGCGGTCGAG
GATCTGCTGG AAACCTCCGA TGACGCGCCC ATCATCCGCA TGCTCAATGC GCTGTTGACA
CAGGCCGCGC GCGACGGCGC GAGCGACATC CACATCGAGC CTTACGAGCG GCATTCGAGC
GTGCGTTTTC GCGTGGACGG CACCCTGCGC GAAGTCGTGC AGCCCAACCG GGCGCTGCAC
GCCGCGCTGA TCTCGCGCCT GAAGATCATG GCGGACCTGG ATATTTCGGA AAAACGCCTT
CCGCAGGATG GCCGCATCAG CCTGCGCATT GGCACGCGAG CGGTGGACGT GCGTGTGAGC
ACCTTGCCCA GCGCCCACGG TGAGCGCGCC GTGTTGCGCC TGCTGGACAA GAGCGAGAGC
AAGCTGAGCC TGGAGTCGGT CGGCATGCAG GGTGATGTGC TTCACCGTTT CGAACACCTG
ATCGCCCAGC CGCACGGCAT CATCCTGGTC ACCGGCCCCA CGGGTTCGGG TAAAACCACC
ACCCTTTATG CTGCCTTGCA GCGGCTCGAT GCCAGCGCCA GCAACATCAT GACGGTCGAA
GATCCCATCG AGTACGAGCT TGCGGGCATC GGGCAGACGC AGGTCAATTC AAAGATAGAC
CTGAGCTTTG CCAAGGCGCT GCGCGCCATC CTGCGCCAGG ACCCGGACGT GATCATGATC
GGTGAGATCC GGGATTTTGA GACCGCGCAG ATCGCCATAC AGGCCTCGCT GACCGGCCAC
CTGGTGCTCG CCACGCTGCA CACCAATGAT GCGTCCAGTG CCGTGACGCG CCTGACCGAT
ATCGGTGTGG AGCCCTTTTT GCTGAGTTCG TCCCTGCTCG GCGTGCTGGC ACAGCGGCTG
GTGCGCAAGC GGTGCACCTA CTGCCATGCT TCTTCGGCAG GTCCGGGCCT GGCCGCCGGC
TGCGAGCATT GCGGCTATAC CGGTTACGCG GGCCGTACGG GCGTCTTTGA GTTGCTGGTG
ACCGATGACG CTGTTCGCGC CCAGATTCAC AACCGCGCGT CTGAGGCAGA AATTCGCGCA
GCCGCGCTGC AGGCGGGCAT GATGCTGATG CGCGACGACG GTGAGCGGCT GGTCACCGCC
GGCGTCACCT CGCGCGAGGA GTTGCTGCGC GTGACCCCCG ACTGA
 
Protein sequence
MRYPLPYAFA RSNTLLLEDD GHALTLWHPA RPDPAALGEV MRKFAAHSPA LVLQCADAGT 
LTQRISAAYA AGESSAAAVV SEVESDADLS RIMQELPAVE DLLETSDDAP IIRMLNALLT
QAARDGASDI HIEPYERHSS VRFRVDGTLR EVVQPNRALH AALISRLKIM ADLDISEKRL
PQDGRISLRI GTRAVDVRVS TLPSAHGERA VLRLLDKSES KLSLESVGMQ GDVLHRFEHL
IAQPHGIILV TGPTGSGKTT TLYAALQRLD ASASNIMTVE DPIEYELAGI GQTQVNSKID
LSFAKALRAI LRQDPDVIMI GEIRDFETAQ IAIQASLTGH LVLATLHTND ASSAVTRLTD
IGVEPFLLSS SLLGVLAQRL VRKRCTYCHA SSAGPGLAAG CEHCGYTGYA GRTGVFELLV
TDDAVRAQIH NRASEAEIRA AALQAGMMLM RDDGERLVTA GVTSREELLR VTPD