Gene Bpro_1291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_1291 
Symbol 
ID4012184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp1333355 
End bp1333969 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content62% 
IMG OID637940968 
Productpeptidyl-tRNA hydrolase 
Protein accessionYP_548139 
Protein GI91787187 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0193] Peptidyl-tRNA hydrolase 
TIGRFAM ID[TIGR00447] peptidyl-tRNA hydrolase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.800618 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAAC TTTTTGTTGG CCTGGGCAAC CCGGGTGCCG AATACGAGGC GACCCGCCAC 
AACGCCGGCT TCTGGTGGAT AGACGCGCTC TCGCGCGAAT TGCAGGCGCC GCTCACCCTG
GACAAGAGTT ATCACGGACA GGTCGCGCGC ACCACCCTGA ACGGCAAAAC CGTATGGCTT
CTCAAGCCCC TGACCTTCAT GAATGTCTCG GGCAAATCCG TGGCGGCGCT CGCCCGGTTT
TTCAAGATCG CGCCCGACGA GGTGCTGGTG GCCCACGACG AACTCGACAT CGTGCCCGGA
CAGGTCAAAC TCAAGTTTGG CGGCAGCCAT GCGGGCCACA ACGGCCTGCG CGACATTCAT
GCCCAGCTCG GCACCGACGA CTACTGGCGC CTGCGCATCG GCGTAGGCCA TCCCGGCGTG
AAAGCCGAGG TCATCAACTG GGTGCTGAAA AAGCCGTCAC AGGAACATCG CGTAGCGATT
GAAGAATGCA TTGACCGCGC ACTCAAGGCG GTACCGGCCC TGCTGGCAGG CGAGATGGAA
AAAGCCACCA TGCTGATTCA CACCAGCCAG CCACCGCGTC CCAAGCCACC GCGCAGGACG
GAACCGGAAG ACTGA
 
Protein sequence
MIKLFVGLGN PGAEYEATRH NAGFWWIDAL SRELQAPLTL DKSYHGQVAR TTLNGKTVWL 
LKPLTFMNVS GKSVAALARF FKIAPDEVLV AHDELDIVPG QVKLKFGGSH AGHNGLRDIH
AQLGTDDYWR LRIGVGHPGV KAEVINWVLK KPSQEHRVAI EECIDRALKA VPALLAGEME
KATMLIHTSQ PPRPKPPRRT EPED