Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_1290 |
Symbol | |
ID | 4012183 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 1331688 |
End bp | 1332683 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637940967 |
Product | TRAP dicarboxylate transporter, DctP subunit |
Protein accession | YP_548138 |
Protein GI | 91787186 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.877345 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAGA TCGGATTCAT GCTGCTTACC TGGGCGCTGG CCTTTGCCGC TCAGACGGCC ATCGCCAAAA CCACCTTCAA TCTCTCCACG CCCGACCCGG ATAGTTCTGA AATTACCCTG GCAGCCAAAA AATTCGCGGA AATTGTCGCG GCCAAAAGTG GCGGGCAAAT CGAAGTCAAG GTGTTTCCGA ACGGGCAGCT TTACGGGGGT GATCCTTCCG CTGCCGTGCG CCAACTGGCG AGCGGGTCCT TAGATATGCT GCTGCTGTCA AGCTCGCTGT ATGCCAACTT CAATCCGAAG TTCACCGCCA TCTCCGTCCC GTACCTGTTT GATGACAATG CCCAGCTTCG TGCTTATCTG GCAGGCCCCC TGGGGCAGGA GTTGCTCACT GACCTGAACG GCATAGGCAT CAAGGGGTTG GCGCTCTGGC AGCGTCCGTT CCGTCAGATG ACCAATTCGC GCCGGGCGAT CAACCAGCCG CAGGATCTGG CCGGGATGAA GTTCCGTGTC CCGAATAACC CCCTGTGGAT GGAGTTTTTT GGCAAGCTCG GCGCCGTTCC GACCCCCATG GCATTCGGCG AGGTCTACAA CGCCCTGCAG CTGAAGGTGG TCGATGGCCA GGAAAACCCG ATCAACATTC CGGTAACCGC CAAGTTTTAC GAAGTCCAGA AGTTCGCCAC GCTGACCAAC CACATGGCCG ACGGTTGGGT GCTGGCCATC AATCCCGCCA AATTCGCGGC GCTCCCGGAG GCGGAGAAGC AGGCGCTGCA AGCTGCCAGC GTAGAGGCGG AAGCATGGAA GTCTGCCAAT GACGCAGCCG ATGCCAGCCG ATCGGTGGAA TTCCTGCGCT CCAAGGGCGT GCAGGTCAAT AGCCTGAGCC CGGAGCAACA AAAAGCCTTT GTGGCGGTCT CCAAAGAACT GTTCCCCCGC TTCTCAACGC TTGTCAAGGA TCAGGCCTTC TTTGACAAGA CCTTGTCCTT TGTCGGCAAA AAGTGA
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Protein sequence | MSKIGFMLLT WALAFAAQTA IAKTTFNLST PDPDSSEITL AAKKFAEIVA AKSGGQIEVK VFPNGQLYGG DPSAAVRQLA SGSLDMLLLS SSLYANFNPK FTAISVPYLF DDNAQLRAYL AGPLGQELLT DLNGIGIKGL ALWQRPFRQM TNSRRAINQP QDLAGMKFRV PNNPLWMEFF GKLGAVPTPM AFGEVYNALQ LKVVDGQENP INIPVTAKFY EVQKFATLTN HMADGWVLAI NPAKFAALPE AEKQALQAAS VEAEAWKSAN DAADASRSVE FLRSKGVQVN SLSPEQQKAF VAVSKELFPR FSTLVKDQAF FDKTLSFVGK K
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