Gene Bpro_1266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_1266 
Symbol 
ID4011850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp1308808 
End bp1309407 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content66% 
IMG OID637940944 
Productcytochrome C oxidase, mono-heme subunit/FixO 
Protein accessionYP_548115 
Protein GI91787163 
COG category[C] Energy production and conversion 
COG ID[COG2993] Cbb3-type cytochrome oxidase, cytochrome c subunit 
TIGRFAM ID[TIGR00781] cytochrome c oxidase, cbb3-type, subunit II 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAATG AAGTCAAACT GGCCGCTGGC GCGATGGTCG CACTCGCCAT CGCCACCGCA 
GCGCTGGTCG TGATGCCCTA CATCCAGGTA CGCGATGTCA AACCACCGGC GGGCCTCAAG
CCTTATACCG ACCAGCAGCT GCGCGGGCGA GAGGTGTACA TCGCCAACGG CTGCGTGTAT
TGCCACAGCC AGCAGCCGCG CGACCGCAAT CTGGCGCCCG ACCACACGCG CGGCTGGGGC
CGCCCTTCGG TGCCGGCCGA TTATGTGTAC GACAAACCGC ACCTGCTGGG CAGCATGCGC
ACCGGGCCGG ACCTCTTCAA CATCGGCGCG CGCCAGCCCA GCAAGGACTG GCATCTGGGC
CACCTGTACC AGCCGCGTGC CTATGTGCCC GACTCCATCA TGCCGTCGTA TCCCTACATG
TTTCTGGTCA AGGACGCGGC TGAAGAAGGC GACCAGGTGG TGACGCTGCC GCCGGTCTAC
GCGCCTTTTG GCAAGGTCGT GGTGGCCCGG CCGGAGGCAC TGGATCTGGT CAAGTACCTG
CAGGCGCTGA ACCACACCTA CCCCATCCTG CCGGCACCGG CCGTACCGGC AGCGCCTTGA
 
Protein sequence
MENEVKLAAG AMVALAIATA ALVVMPYIQV RDVKPPAGLK PYTDQQLRGR EVYIANGCVY 
CHSQQPRDRN LAPDHTRGWG RPSVPADYVY DKPHLLGSMR TGPDLFNIGA RQPSKDWHLG
HLYQPRAYVP DSIMPSYPYM FLVKDAAEEG DQVVTLPPVY APFGKVVVAR PEALDLVKYL
QALNHTYPIL PAPAVPAAP