| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1259 |
|---|
| Symbol | |
|---|
| ID | 4011843 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 1304111 |
|---|
| End bp | 1305013 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637940937 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_548108 |
|---|
| Protein GI | 91787156 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGAGA GGTTGCAGAA CAGCCGCAAC GCGCTCGGGC TGATCTTCAT GTTGCCGGCG
GCGGTGTTGC TGCTGCTGTT CCTGACCTAT CCGCTCGGGC TGGGCGTGTG GCTGGGCTTC
ACCGACGCCA AGGTCGGCCG GCCGGGCGAG TGGATCGGCA TCGAGAACTA CGTGTTCCTC
GCCACCGACA GCGTCACCCA GCTGGCGCTG TTCAACACGC TGTTCTACAC AACCATTGCG
AGCGTCGCAA AGTTCTTCCT CGGCCTGTGG CTGGCGCTGC TGTTGAACAA GAACATCCGC
TTCAAGTCCT TCTTCCGTGC GGTGATCCTG CTGCCCTACA TCGTGCCGAC GGCCTTGTCG
GCGATCGCCT TCTGGTGGCT GTTCGACGCC CAGTTCTCGA TCATCAGCTG GGTGCTGGTG
AAGCTGGGTG TCATCGACAC CTACATCGAT TTCCTCGGCA GCCCGTGGAA CGCTCGCTTC
TCGGTGATCG CGGCCAACGT GTGGCGCGGC GTACCCTTCG TCGCGATCAC CTTGCTCGCC
GGCTTGCAGA CCATCTCGCC GTCGTACTAC GAAGCCTCGG CGATCGACGG TGCCACCCCC
TGGCAACAGT TCCGCCACGT CACCTTGCCG CTGCTCACGC CGATCATCGC GGTGGTGATG
ACCTTCTCGG TGCTGTTCAC CTTCACCGAC TTCCAGCTGA TCTACGTGAT CACGCGCGGC
GGCCCGCTCA ACGCCACCCA CCTGATGGCC ACGCTGTCGT TCCAGCGCGC GATCTCGGGC
GGCGCGCTTG GCGAGGGCGC GGCGATCTCG ATCGCGATGG TGCCGTTCCT GCTGGCCGCC
ATCATGTTCA GCTACTTCGG CCTGCAGCGC CGCGCGTGGC AACAGGGCGG GGCCGACAAA
TGA
|
|---|
| Protein sequence | MLERLQNSRN ALGLIFMLPA AVLLLLFLTY PLGLGVWLGF TDAKVGRPGE WIGIENYVFL
ATDSVTQLAL FNTLFYTTIA SVAKFFLGLW LALLLNKNIR FKSFFRAVIL LPYIVPTALS
AIAFWWLFDA QFSIISWVLV KLGVIDTYID FLGSPWNARF SVIAANVWRG VPFVAITLLA
GLQTISPSYY EASAIDGATP WQQFRHVTLP LLTPIIAVVM TFSVLFTFTD FQLIYVITRG
GPLNATHLMA TLSFQRAISG GALGEGAAIS IAMVPFLLAA IMFSYFGLQR RAWQQGGADK
|
|---|
| |