| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1256 |
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| Symbol | |
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| ID | 4011840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 1300095 |
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| End bp | 1301063 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637940934 |
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| Product | sigma 32 (RpoH) |
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| Protein accession | YP_548105 |
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| Protein GI | 91787153 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCATACG CTCTTTCCCC CCAGGCCCTG ACGGGCGCCC TTGCTGTACC CGTGCCCCGC
GCCGGTGCTG TGGCCACCGT CAACCCCTGG TCGCTGGTAC CTCCGCTGGG CAACCTGGAT
GCCTACATTT CGGCGGTCAA CCGTCTGCCC ATGCTCACTT TGGAGCAGGA GCAGGAATTT
GCCAAAAAGC TCAAAGAAAA CAACGATCTC GACTCGGCCG GTAAGTTAGT GCTCTCTCAC
TTACGCCTGG TGGTGTCGAT TTCCCGCAAA TACCTGGGTT ACGGGCTGCC GCATGGCGAC
CTGATCCAGG AGGGCAATAT CGGCCTGATG AAGGCGGTCA AGCGCTTTGA CCCGGAACAG
AACGTGCGGC TGGTGAGCTA TGCCATGCAC TGGATCAAGG CCGAGATTCA CGAGTACATC
CTGAAAAACT GGCGCATGGT CAAGGTGGCC ACCACCAAAG CCCAGCGCAA GCTGTTCTTC
AACCTGCGCT CGATGAAACA GGGCTTCAAG GACGACGCCG ATGTGGCGAC GCACCGCGAC
ACGCTGACCG AAGGCCAGAT TGACTCGATG GCCAAAACAC TGAACGTCAA GCGCGAGGAA
GTCATCGAGA TGGAGCAGCG CATGTCGGGC GGCGACGTGC TGCTGGACCC GAGCCCGAGC
GACGACGGCG AAGACGCCTT TGGGCCGATT GCCTACCTGG CCGATGCCAC GCAAGAGCCG
ACCGCCCTGA TGGAATCCCG CCAGCGCGAC AGCCTGGCTT CAGACGGCAT CAGCGCCGCG
CTGCAAGAGC TGGATCCACG TTCGCGCCGC ATTGTGGAAG AGCGCTGGCT CAAGGTCAAC
GACGATGGCT CGGGTGGCAT GACGCTGCAC GACCTGGCGG ACGAGTACCA GGTCAGCGCC
GAACGGATTC GCCAGATTGA AGTCTCGGCA ATGAAGAAAA TGAAAAAGGT GCTGGCGGCC
TACGCCTGA
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| Protein sequence | MSYALSPQAL TGALAVPVPR AGAVATVNPW SLVPPLGNLD AYISAVNRLP MLTLEQEQEF
AKKLKENNDL DSAGKLVLSH LRLVVSISRK YLGYGLPHGD LIQEGNIGLM KAVKRFDPEQ
NVRLVSYAMH WIKAEIHEYI LKNWRMVKVA TTKAQRKLFF NLRSMKQGFK DDADVATHRD
TLTEGQIDSM AKTLNVKREE VIEMEQRMSG GDVLLDPSPS DDGEDAFGPI AYLADATQEP
TALMESRQRD SLASDGISAA LQELDPRSRR IVEERWLKVN DDGSGGMTLH DLADEYQVSA
ERIRQIEVSA MKKMKKVLAA YA
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