| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1245 |
|---|
| Symbol | |
|---|
| ID | 4012293 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 1290371 |
|---|
| End bp | 1291573 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637940923 |
|---|
| Product | cytochrome c oxidase, subunit II |
|---|
| Protein accession | YP_548094 |
|---|
| Protein GI | 91787142 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2
[COG2010] Cytochrome c, mono- and diheme variants |
|---|
| TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.731852 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGTAA GCAACACCAT GAGCAAAATG ACACGGCTTG GCATGCAGCA TGCAGGCGCA
ATTCTGGCCT CTGCGGCCGC CTGGGTCAGC ACCGCCGCCC ATGCCGTCAA CGACCTGCCC
GGTGGGCCGG CTGTCAATCA GCTCAACTTG CATCCAGCAG TCACCAAAAT TGCAGAAGAG
CAGAACTGGC TGCACTGGTT CATGATGATC ATCTGCCTCG TGATTTTTGT CGCGGTGTTC
GCTGTGATGT TCTATTCCAT CTGGAAGCAC CGCAAATCGG TGGGCCACAA GTCGGCCAAC
TTCCATGAGT CCACCGCGGT TGAAATTGCC TGGACCATCG TGCCTTTCCT CATCGTGATC
GCCATGGCCT TGCCAGCCAC CAAAGTGCTG GTGGCCCAAA AAGACACGAC CAGCGCCGAC
CTCACCATCA AGGCCACGGG TATCCAGTGG AAATGGGGTT ACGACTACAT CAAGGGCGAA
GGGGAGGGCA TCGGCTTTGT CTCCACGCTC GACAACACGC ATCGTGAAAT GTCAGACCAG
GGCGGCCCGA AAGCCGGTCA AGCGCCAGAC AACTACCTGC TCAAGGTCGA TAACCCGCTG
GTCGTTCCGG TCAACAAGAA AATCCGTATC ATCACCACGG CCAGCGACGT GATCCATGCC
TTCATGGTGC CGGCATTCGG CATCAAGCAG GATGCGATTC CCGGCTTTGT GCGCGACACC
TGGTTCCGTG CCGAAAAAAT CGGTGACTAC TATGGCCAGT GCGCCGAGTT GTGCGGCAAG
GAACACGCCT ACATGCCCAT CCACGTGAAA GTGGTGTCCG CCCAGGATTA CAGCGCCTGG
GTGGCGGTCA AGGCGAAGGA AGCTGCCGCC AAGGCGGATG ATCCGACCAA GGTCTGGACC
CTGGTGGATC TGAAGGCCCG CGGCGAGAAG GTCTATGCGG CCAATTGCGC AGCCTGCCAC
CAGGCCAACG GCAAGGGCGC AGGCCCGATC AAGCCGCTGG ACGGTGCCGC CGTCGTGCTG
GATGCCGATC ACGCCAAGCA GATCCAGACC GTACTCAACG GTGCAGCCGG TGGTGCCATG
CCTTCGTGGA AGGCACTGAG CGATACCGAT CTGGCCGCGG TGGTCACCTA CACCAAGAAC
AACTGGTCCA ACCAGACGGG CCGTATCGTG CAGCCTGCGC AGATCCAGGC AGCACGCAAG
TAA
|
|---|
| Protein sequence | MNVSNTMSKM TRLGMQHAGA ILASAAAWVS TAAHAVNDLP GGPAVNQLNL HPAVTKIAEE
QNWLHWFMMI ICLVIFVAVF AVMFYSIWKH RKSVGHKSAN FHESTAVEIA WTIVPFLIVI
AMALPATKVL VAQKDTTSAD LTIKATGIQW KWGYDYIKGE GEGIGFVSTL DNTHREMSDQ
GGPKAGQAPD NYLLKVDNPL VVPVNKKIRI ITTASDVIHA FMVPAFGIKQ DAIPGFVRDT
WFRAEKIGDY YGQCAELCGK EHAYMPIHVK VVSAQDYSAW VAVKAKEAAA KADDPTKVWT
LVDLKARGEK VYAANCAACH QANGKGAGPI KPLDGAAVVL DADHAKQIQT VLNGAAGGAM
PSWKALSDTD LAAVVTYTKN NWSNQTGRIV QPAQIQAARK
|
|---|
| |