| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1231 |
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| Symbol | |
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| ID | 4012279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 1276523 |
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| End bp | 1277725 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637940909 |
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| Product | Beta-ketoadipyl CoA thiolase |
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| Protein accession | YP_548080 |
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| Protein GI | 91787128 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases
[TIGR02430] beta-ketoadipyl CoA thiolase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000042843 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAGG CTTTTATCTG CGATGCCATT CGCACCCCCT TCGGCCGCTA CGGCGGCGCC
TTGAGCAGCG TGCGTGCTGA TGACCTTGGC GCGATTCCGC TCAAGGCCCT GATGGCGCGC
AACTCCAACG TCGACTGGCA ACTGGTGAGC GACGTGATCT TCGGCTGCGC CAACCAGGCC
GGCGAAGACA ACCGCAACGT GGCGCGCATG TCCAGCCTGC TGGCCGGCCT GCCGCTGGAG
CTGCCCGGCG CCACCATCAA CCGCCTGTGC GGCTCCGGCC TGGACGCCCT GGGCACGGCC
GCCCGCGCCA TCAAGTCGGG CGAGGCCCAA CTGATGATCG CCGGAGGCGT CGAAAGCATG
AGCCGCGCAC CGTTCGTCAT GCCCAAAGCC GAAAGCGCCT TCAGCCGCGC CAACGCTGTG
TATGACACCA CCATAGGCTG GCGCTTCGTC AACAAGCTGA TGAAGGAAAA GTACGGCGTC
GACGCCATGC CCGAAACCGC CGAGAACGTG GCCACCGACT ACAAGATCAG CCGCGAAGAC
CAGGACAAGA TGGCCCTGGC CAGCCAGCTC AAGGCCGTGG CGGCCCAAAA AGCAGGCTAC
TTCGATGCCG AAATCACGCC CGTGACGATC GCGCAGAAAA AGGGCGATCC CATCATCGTG
AACAAGGACG AGCATCCGCG CGAGACCTCG ATGGAAACGC TGGCCCGGCT CAAGGGCGTG
GTGCGTCCCG ATGGCTCCGT TACCGCCGGC AATGCCAGCG GCGTCAACGA CGGCGCCTGC
GCGCTGCTGC TCGCCGATGA GGCCAGCGCG GCCAAGAACG GCCTGACGCC CAGGGCCCGC
ATCGTCGGCA TGGCCACGGC GGGCGTGGCG CCGCGCATCA TGGGCATAGG CCCCGCGCCG
GCCACGCAAA AAGTGCTGGC GCTCACCGGC CTGACGCTGG CGCAGATGGA CGTGATCGAG
CTCAACGAAG CCTTTGCCGC GCAGGGCCTG GCGGTGCTGC GCCTGCTCGG CGTGCGTGAT
GACGACCCGC GCGTCAACCC CAATGGCGGC GCCATTGCGC TGGGCCACCC GCTGGGCGCC
AGCGGTGCCC GCCTGGCCAC CACGGCGGTC AACCAGCTGC ACAAGGGCGG CGGGCGCTAT
GCGCTGTGCA CCATGTGCAT TGGCGTGGGG CAGGGCATTG CGGTGATTCT TGAGCGGGTT
TGA
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| Protein sequence | MNQAFICDAI RTPFGRYGGA LSSVRADDLG AIPLKALMAR NSNVDWQLVS DVIFGCANQA
GEDNRNVARM SSLLAGLPLE LPGATINRLC GSGLDALGTA ARAIKSGEAQ LMIAGGVESM
SRAPFVMPKA ESAFSRANAV YDTTIGWRFV NKLMKEKYGV DAMPETAENV ATDYKISRED
QDKMALASQL KAVAAQKAGY FDAEITPVTI AQKKGDPIIV NKDEHPRETS METLARLKGV
VRPDGSVTAG NASGVNDGAC ALLLADEASA AKNGLTPRAR IVGMATAGVA PRIMGIGPAP
ATQKVLALTG LTLAQMDVIE LNEAFAAQGL AVLRLLGVRD DDPRVNPNGG AIALGHPLGA
SGARLATTAV NQLHKGGGRY ALCTMCIGVG QGIAVILERV
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