| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1229 |
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| Symbol | |
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| ID | 4012277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 1275027 |
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| End bp | 1275743 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637940907 |
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| Product | 3-oxoacid CoA-transferase, subunit A |
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| Protein accession | YP_548078 |
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| Protein GI | 91787126 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
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| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000422585 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAACA AGATTGCCCG CTCCATCGCC GATGCGCTGG CGGACGTGAA AGACGGCTCA
ACCATTCTGA TCGGGGGTTT TGGCACCGCC GGCATTCCCA ATGAGCTCAT CGACGGCCTG
ATTGCGCAGG GCGCCAAAGA CCTGACCGTG GTCAACAACA ACGCGGGCAA CGGCGAGACC
GGGCTGGCGG CCCTGCTGAA GGCCGGGCGG GTGCGCAAAA TCATCTGCAG CTTTCCGCGC
CAGGCCGACA GCCATGTGTT CGACGGGCTG TATCGCAGCG GCAAGCTGGA GCTGGAACTG
GTGCCGCAGG GCAACCTGGC CGAGCGGATT CGCGCTGCGG GAGCGGGCAT AGGCGCATTT
TTCTCGCCCA CGGGCTACGG CACCGAGCTG GCCAAAAATT CGGATGGCTC GGCCAAGGAA
ACACGCGAAC TCAACGGCAA GCAGTACGTG CTGGAGATGC CGATTTACGG CGATGTGGCC
TTGATCAAGG CCGAACAGGG CGATCGCTGG GGCAACCTGA CGTACCGCAT GGCGGCGCGC
AATTTTGGCC CGGTGATGGC CACGGCCGCT GCAAAAACCG TGGCAACGGT GCACGAGATT
GTCGAGCTCG GCGCGCTCAA TCCGGAGCAC ATCGTGACGC CCGGCATCTT CGTGCAGCAG
ATCGTGAAGA TAGACCGCGT GGCGACCCAG GCCGGCGGCT TCAAAAACGT GGCCTGA
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| Protein sequence | MINKIARSIA DALADVKDGS TILIGGFGTA GIPNELIDGL IAQGAKDLTV VNNNAGNGET
GLAALLKAGR VRKIICSFPR QADSHVFDGL YRSGKLELEL VPQGNLAERI RAAGAGIGAF
FSPTGYGTEL AKNSDGSAKE TRELNGKQYV LEMPIYGDVA LIKAEQGDRW GNLTYRMAAR
NFGPVMATAA AKTVATVHEI VELGALNPEH IVTPGIFVQQ IVKIDRVATQ AGGFKNVA
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