| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1228 |
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| Symbol | |
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| ID | 4012276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 1274059 |
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| End bp | 1274862 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637940906 |
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| Product | IclR family transcriptional regulator |
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| Protein accession | YP_548077 |
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| Protein GI | 91787125 |
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| COG category | [K] Transcription |
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| COG ID | [COG1414] Transcriptional regulator |
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| TIGRFAM ID | [TIGR02431] beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00154779 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAATC CCGCCTCCAC ACGCATCGCA GACCTTAAAC CCGGCGACGG GTATGTGCAA
TCCTTTGCAC GCGGGTTACA GGTCATCCGC TCCTTCAGTG CCAGCGCACC GCGCCAGACA
CTGACCGAAG TGGCGCAACG CAGCGAGCTG AGCCGCGCCG GTGCGCGCCG CATCCTGCTG
ACGCTGGAGT CGCTGGGCTA TGTGCGCAGT GAAGGCAAGC TGTTCAGCCT GACACCACGC
ATTCTCGATT TGGGGTTTGC CTACCTCTCG TCCATGCCAA TCTGGAACCT AGCCGAGCCG
GTCATGGAAA CGCTGGTCGC GCAGGTCAAG GAGTCCTGCT CGGCAGCGGT GCTGGACGGC
ACGGACATTG TGTATGTGCT GCGCGTGTCC ACCCACAAGA TCATGAGCAT CAGCCTGGGC
ATCGGCTCCC GGCTACCCGC CTACTGCACC TCGATGGGCC GCATGCTGCT GTCTGCCTTG
CCAGAAACCG AGTTGATGGA GTGCCTGGAA CGCTCGGAGC GGACGGCCCG GACCAAGTAC
ACCGCGGTCG ATGTGAAGGA GATCGCGGCC CGGATTGCGC AGGTTCGCAA ACAGGGCTGG
TCGCTGGTGA ATCAGGAACT CGAAGAAGGA CTGGTGTCGA TGGCCGCGCC CATCACCAAC
CGGGCCGGCC AGATGGTGGC GGCGCTGAAC ATCAGTGGCC AGGCCAACCG TACCAGTGCC
AAGGTGATGC AGGAAACCAT GCTGCCGCAA CTGCTCGCGG CTGCACAAGC GATATCGCGC
ATGCTGAGTG TTCAGCGCAG CTGA
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| Protein sequence | MANPASTRIA DLKPGDGYVQ SFARGLQVIR SFSASAPRQT LTEVAQRSEL SRAGARRILL
TLESLGYVRS EGKLFSLTPR ILDLGFAYLS SMPIWNLAEP VMETLVAQVK ESCSAAVLDG
TDIVYVLRVS THKIMSISLG IGSRLPAYCT SMGRMLLSAL PETELMECLE RSERTARTKY
TAVDVKEIAA RIAQVRKQGW SLVNQELEEG LVSMAAPITN RAGQMVAALN ISGQANRTSA
KVMQETMLPQ LLAAAQAISR MLSVQRS
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