Gene Bpro_1223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_1223 
Symbol 
ID4011808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand+ 
Start bp1270934 
End bp1271599 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content58% 
IMG OID637940901 
Productcytochrome c, class I 
Protein accessionYP_548072 
Protein GI91787120 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.153054 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.842605 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAGC TGTTGACCAC GATATTCGCT GTAGCTGTCT CCTGTGTGAC GGTCTCAAGC 
CTGGCCCAGG AAGTTAAGGG CGATGCCAAA GCCGGCGAAA CCAAGAACGC CATGTGCATT 
GGCTGTCACG GCATCAAGGG CTACCAGGCC TCGTTCCCCG AGATTTACAA GGTGCCGATG 
ATTTCCGGCC AGGGGGGCAA ATACATCGTG GCCGCGCTCA ATGCCTACAA AAAAGGTGAG 
CGCAAGCATC CGACCATGCG CAGCATTGCC GAGTCGCTGA ACGACCAGGA CATCGCCGAC 
CTGGCTGCTT ATTACAGTAC GCATGGTGCG GCAGCAGGTG CCGAGCTTCC TGCCAAGCCA 
GCCAAAGAAC CCAGCGCTGA TGTGCAGGCC CTGCTGAACA AGGCCAATTG CGCTTCATGC 
CACGGCGCCA ATTTCAGCAA ACCGGTCGAT CCGGCCTATC CCAAGATTGC CGGCCAGCAC 
AGTGATTACC TGTTCGTGGC GCTCAAGGCC TACAAGACCG ACAACAACCC CAAGGTGGGT 
CGCGGCAACG CCATCATGGC GGGCATGGCC AAGCAGTACA CCAATGCCGA GCTGAAGCTG 
CTGGCGAACT ACCTGGCTTC GGTGGACGGT GAACTCAAGG TGATTCCCCA GAGCAAGTTC 
CGCTGA
 
Protein sequence
MNKLLTTIFA VAVSCVTVSS LAQEVKGDAK AGETKNAMCI GCHGIKGYQA SFPEIYKVPM 
ISGQGGKYIV AALNAYKKGE RKHPTMRSIA ESLNDQDIAD LAAYYSTHGA AAGAELPAKP 
AKEPSADVQA LLNKANCASC HGANFSKPVD PAYPKIAGQH SDYLFVALKA YKTDNNPKVG 
RGNAIMAGMA KQYTNAELKL LANYLASVDG ELKVIPQSKF R