| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1188 |
|---|
| Symbol | |
|---|
| ID | 4012138 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 1227517 |
|---|
| End bp | 1228890 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637940865 |
|---|
| Product | protein of unknown function DUF224, cysteine-rich region |
|---|
| Protein accession | YP_548037 |
|---|
| Protein GI | 91787085 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0247] Fe-S oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.584674 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTGACA TGCTCGTATT CAAGCAGTTC CAGGAGGCCA TTGAGCATCT GGGCGAGATG
GCCCAGCCCG AGCCCATCGC GGACGAGGAG CGGGTGTCCC GGGCCAAAGC GGTCATGCGG
CGCAAGACCG ACCGGGGTCT GGCGCTCGAC CTCGAGGCTT GCGTCAATTG CGGCTACTGT
TCCGAGGCCT GCCACTTTTA CCAGTCCACG CAGGACCCGA AGTACACGCC GACCCGCAAG
CTGGACCTGC TGCGCCGCGT GCACGCGCGG GAAAGCTCGG CGTTCGCCCC CATCGTGCGC
TGGTTCACGC GCGACATCAG CCTGGAGGAT CTGCAGGAAT GGCAGGAACT CGTCTATGAC
TCCTGCGCCG AGTGTGGCCG TTGTAGCATG GTCTGCCCGA TGGGCATCAA CATTGCCCGC
GGCGTCAACG TGATGCGCGA GGCGCTGTCC GAAGCGGGCC TGGCGCCGCT GGAACTGATG
GCGGTTGCCC AGGAGCAGGC CGGTCGCGGA ACGGTGTTTG GGGTCGGACC GGCCGAACTG
GCGCAGGTGG TCAAGGCGCT GCGCGAGCAG GGTATCCGCG TGCCGCTCGA CGAGCCACGG
GCCGATGTGT TGCTGGTCAC GACCGTGATC GACGTGCTGC TGTTCCAGGA CGCGTTGGCT
GCGACCGCAC GAATCCTCAA TCATCTGGGT GTCGACTGGA CGCTGCGCAG CGCCGGGTTC
GAGGCCGCCA ACTTCGGGCT GCTGGCCGGC AACGAGGCCT TGCAGAAGGC GGCCAGCCAA
CGGCTCATTG ACGAAGCGCT GGTGATTGGC GCCAAGGTCC TGATCCTTCC GGAATGTGGC
CACGCCTACC CGGCTCTGCG CTGGGAAGGG AAGTTGGCCG ATGGAAAGCC ACTGCCGTTC
GAGGTGCTGG CGGCGGCCGA GTTCGTTGGA CGCGAGATCC GCGGGGGGCG CCTCGCACTC
TCGCCCGGCG ATTCGAACCG CAAGCTGACC TATCACGATG CCTGCAAGCT CGCGCGCCAT
GGCGGCGTGA TCGACGAGCC CCGCGTCGCG CTGCGCGCGC TGGGCGTCGA TTTCCGCGAA
ACAACGCCCA CGGCCGAGCT GAACTGGTGC TGTGGCGGGG GAGCCGGGGC CTTCCTGATC
AATCGTGCAG CGCCGCTGCG GCACAAGGCA TGGGAAATCA AGCGGGCGCA AATCGATGCC
ACCGGCGCCG ACACGGTCGT GGTGTCGTGC GCGAGTTGCC GCCTCAACTT CATGGAAGGC
GCCGAAATCG GGCAGTCGCG GATGCGCATT GAAAGCCTGG TCGAGCTCGT CGTCGCCCAA
TTGCCAGGAC TACCGGCTAC CGTGCGCGAG CCATCCCCCG ACCCGGATGT GTGA
|
|---|
| Protein sequence | MIDMLVFKQF QEAIEHLGEM AQPEPIADEE RVSRAKAVMR RKTDRGLALD LEACVNCGYC
SEACHFYQST QDPKYTPTRK LDLLRRVHAR ESSAFAPIVR WFTRDISLED LQEWQELVYD
SCAECGRCSM VCPMGINIAR GVNVMREALS EAGLAPLELM AVAQEQAGRG TVFGVGPAEL
AQVVKALREQ GIRVPLDEPR ADVLLVTTVI DVLLFQDALA ATARILNHLG VDWTLRSAGF
EAANFGLLAG NEALQKAASQ RLIDEALVIG AKVLILPECG HAYPALRWEG KLADGKPLPF
EVLAAAEFVG REIRGGRLAL SPGDSNRKLT YHDACKLARH GGVIDEPRVA LRALGVDFRE
TTPTAELNWC CGGGAGAFLI NRAAPLRHKA WEIKRAQIDA TGADTVVVSC ASCRLNFMEG
AEIGQSRMRI ESLVELVVAQ LPGLPATVRE PSPDPDV
|
|---|
| |