Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_1186 |
Symbol | |
ID | 4012136 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 1225952 |
End bp | 1226677 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637940863 |
Product | ABC transporter related |
Protein accession | YP_548035 |
Protein GI | 91787083 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.225539 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGCTGCCA GCATACCCGC CACCGTCGGC ATCCGGATTG ATGGGCTGAG CAAGCGCTAT GGCACCGGCA CGACCGCCGT TGATGCGCTG AAGGACGTCA ACATGAGCGT GGCTCCCGGC GAAGTGGTCG GGCTGATCGG CCCCAGCGGG TCGGGCAAGA CCACGCTGCT CAAGTGCCTG GGGGCGATTA CGACGCCGAC GCGCGGCCGC ATGACGCTGG GCGGCGAAGT CATCTTTGAC CAAGAATGGA AGATCACCGA CCTCACGGCA TTGCGGCGTG ATCGCATTGG TTTCGTCTTC CAGTCCCCGT ACCTGATCCC GTTCCTCGAC GTCACTGACA ACGTCGCACT CCTGCCAATG CTGGCGGGGC AGCCCGACGC GCAGGCGCGG GCGCGGGCCA TGGAGCTGTT GCAGGGACTC GATGTCGCGC ATCGCGCGAA GGCCCTGCCG TCAGAACTCT CCGGCGGCGA GCAGCAGCGG GTATCCATTG CCCGCGCCCT GGCTAACCGC CCGCCGGTGA TCCTGGCCGA CGAACCCACC GCACCACTGG ACAGTGAACG GGCCCTGGCG GTGATGCGCA TCCTCAACCA GATGGCGGCG CAGTATCAGA CCGCCATCAT CGTCGTTACG CACGACGAAA AGATCATTCC CACCTTCAAG CGCATTTACA ACATCCGCGA CGGGCGGACG GTTGAGGAGG CGGGGCAGGG GCGTGCGCTT CAGTAG
|
Protein sequence | MAASIPATVG IRIDGLSKRY GTGTTAVDAL KDVNMSVAPG EVVGLIGPSG SGKTTLLKCL GAITTPTRGR MTLGGEVIFD QEWKITDLTA LRRDRIGFVF QSPYLIPFLD VTDNVALLPM LAGQPDAQAR ARAMELLQGL DVAHRAKALP SELSGGEQQR VSIARALANR PPVILADEPT APLDSERALA VMRILNQMAA QYQTAIIVVT HDEKIIPTFK RIYNIRDGRT VEEAGQGRAL Q
|
| |