| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1184 |
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| Symbol | |
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| ID | 4012134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 1223570 |
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| End bp | 1224760 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637940861 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_548033 |
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| Protein GI | 91787081 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCTGC CCTTCACCTT GCCCAGATGG GTCTGGTTGA CAGCTGCCGG GGTGGCGGTG
CTACTGGCCT TCGGCTGGGT GGCCACGGCA AGTGGGCCGC TCGCGCCGAT CAAGGTGACT
GTGACCCAGG TGGCCACGGG GACGGTGGCG CCGTCGCTGT TCGGCATTGG CACGGTCGAG
GCGAGACGCG CGTATCTCAT TGGGCCGACC ACAGCCGGTC GGGTCAAGCG CGTGCTGGTC
GACGTGGGCG ACAGGGTGAG GGCCGGCCAG TTGCTGGCAG AAATGGATCC GGTGGATCTG
GATGCGCGGG TTGGCTCGTC GGCTGCGGCG GCGGCCCGCG CCCAAAGTGC GGTGGCGACA
GCGCAGGCCC AGGTGCGCGA TGCGCAGAGC CGCCAGGCCT TGGCCGCCGG TGAGGCGCGG
CGCTACATCG ACCTCGGAAA ACAGAACTTC ATTAGCCCGA GCGTCGTGGA GGGCAAGCTG
CAGCAACAAC AATCGGCCGA TGCCCAGCTG GTCGCCGCCC GATCGGTTCA GACGAGCGCC
CGGCAGGACG TGAGCCGTCT GGAGGCCGAG CGTGAGGGGG CGCGACAGCA ACGCGGGAAT
ATCCGCCTGG AGGCACCGAT TGACGGGGTG GTGACATCAC GCGATGCGGA GCCGGGCTCC
ACAGTCGTGG CGGGTCAGGC GGTACTCAAG CTGATCGACC CCGCCAGCCT GTGGGTAACG
ACGCGGCTGG ACCAGAGTCG ATCCGCGGGA TTGCATGAGG GGCTGCCCGC CGAAATCACG
CTGCGGTCCA GCGCGCAAGG GAGCGTGCCT GGCAAGGTAG TGCGGCTTGA GCTCGTCAGC
GACAGCGTCA CCGAGGAGCG GATTGCGCGG GTGACGTTCG AGAGGCTGCC TGCTGGCGTG
TCGACCGGCG AAATGGCCGA GGTTATCGTC CGACTGCCTC CCGTGCGCGA CGCGTTGTTG
ATCCCCAATG CGGCGCTGCG CCAGCGTGGC GCCCGGGCGG GGGTGTGGCT GCATGACGAT
GGCAAGCTGC GCTTCGTCAG CGTCAAGACG GGCGCTGAAG GCCCGGACGG CATGGTGCAG
ATCATCGATG GCCTGAAGGC CGGCAACGAG GTGGTGGTCT ACAGCGGGCG CGAACTGGAG
GCCGGCAGTC GAATCAAGGT CGTGCCCTCG CTGGTCGAGG CTGCAAAGTG A
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| Protein sequence | MRLPFTLPRW VWLTAAGVAV LLAFGWVATA SGPLAPIKVT VTQVATGTVA PSLFGIGTVE
ARRAYLIGPT TAGRVKRVLV DVGDRVRAGQ LLAEMDPVDL DARVGSSAAA AARAQSAVAT
AQAQVRDAQS RQALAAGEAR RYIDLGKQNF ISPSVVEGKL QQQQSADAQL VAARSVQTSA
RQDVSRLEAE REGARQQRGN IRLEAPIDGV VTSRDAEPGS TVVAGQAVLK LIDPASLWVT
TRLDQSRSAG LHEGLPAEIT LRSSAQGSVP GKVVRLELVS DSVTEERIAR VTFERLPAGV
STGEMAEVIV RLPPVRDALL IPNAALRQRG ARAGVWLHDD GKLRFVSVKT GAEGPDGMVQ
IIDGLKAGNE VVVYSGRELE AGSRIKVVPS LVEAAK
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