| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1178 |
|---|
| Symbol | |
|---|
| ID | 4012128 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 1216896 |
|---|
| End bp | 1219286 |
|---|
| Gene Length | 2391 bp |
|---|
| Protein Length | 796 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637940855 |
|---|
| Product | heavy metal translocating P-type ATPase |
|---|
| Protein accession | YP_548027 |
|---|
| Protein GI | 91787075 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[S] Function unknown |
|---|
| COG ID | [COG2217] Cation transport ATPase
[COG3350] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCTC ACACGCCATC CTTACGTTCG CCAGAACCCA TGCAGCCTGA AACGGCAGAC
AGCGGGCACC CCGTCATGCC CCATGCGCAT GGCGCTGGGG CCGCTGAATC AACGTCCCTG
AAAGACCCGG TTTGCGGCAT GCCTGTTACC GAACGGTCCG CGCATTGGCA CGAGCATGAA
GGCCGGCGCT ATTACTTCTG CAGCGCGCAT TGCAAGAACA AGTTCGGTGC AGACCCGGGG
CGATTCGTCA CCCCGGAGCC GGCGCTTGCG CCAGAGTCGG CAGCGCCCGC CGGCACGATT
TACACCTGCC CGATGCATTC GGAGATACGC CAGGACCATC CCGGCAATTG CCCCAAGTGC
GGCATGACGC TCGAACCCCT GCTGCCCGAG CTCGAAGATG GCGAGAATGC GGAGCTGGTC
GATTTCCAGC GGCGCTTCTG GTGGACGCTG CCGCTGACCG GGGTCGTGAC GCTGATGGCG
ATGTTTGGCC ACAGGCTGAA CTGGTTTGAC ATGGCTACGC AAAGCTGGCT CGAGTTGGTC
CTGTCCCTGC CTATCGTGCT GTGGGCCGGC TGGCCGTTCT TCCAGCGTGG CTGGCAGTCG
GTGGTGAATC GCAGCCCCAA CATGTGGACG TTGATCGGCC TGGGCACCGG TGCCGCCTTC
GTCTACAGCG TGGTCGCGAC CGTCGCACCC CAGGTGTTTC CGGCCTCGTT CGTGTCCATG
GGGCGGGTCG CCGTGTATTT TGAAGCGGCT GCCGTGATCA TCTCGCTGAC GTTGCTGGGC
CAGGTGCTGG AGCTCAAGGC CCGCTCGCAA ACCTCGGCCG CGATCAGGTC CCTGCTCGGG
CTGGCACCCA AGACCGCCCG GCGCATCCGG GCCGACGGGA GCGAGGAGGA TGTGCCTTTG
AATCACGTCC ATGTGGGCGA CATGTTGCGC GTTCGACCCG GCGAGAAAGT GCCTGTCGAT
GGCGTGGTGG TCGAAGGCGG CAGTTCGGTG GACGAGTCGA TGCTTACCGG CGAGCCGATG
CCGGTCACCA AGCGTGTCGG TGACAAGGTC ATCGGCGCAA CGCTCAACAC CAGTGGGGCC
ATGGTGATGC GGTCTGAGCG GGTGGGCGCG GCCACCATGC TGGCGCAAAT CGTCCAGCTG
GTCGCGCAGG CCCAGCGCTC AAAAGCCCCG ATGCAGCGCA TGGCCGACGT GGTGGCCGGC
TATTTTGTGG TCTCCGTGGT GGCGGTTGCA CTGCTGACGT TCTTCGGCTG GGGGCTGTTC
GGGCCCGAGC CGCGCTGGGT CTTCGGCCTG ATCAACGCCG TCGCGGTGTT GATCATCGCC
TGTCCGTGCG CCCTGGGTCT GGCCACGCCG ATGTCCATCA TGGTGGCCAC GGGTCTTGGC
GCGACGCGGG GCGTGCTGTT CCGCGATGCG GCGGCCATCG AGAACCTGCG CAAGATCGAC
ACGCTCATCA TCGACAAGAC CGGCACCCTG ACCGAGGGAC GCCCGCGGTT CGACCGCGCC
ATTCCGGCCC CAGGGTTTGA AGCCGACGAG GTGTTGCGCC TCGCGGCGAG CCTGGATCAG
GGCAGCGAGC ACCCGCTGGC GGACGCCATC GTGGCTGCGG CCCGCGAGCG TGGCATGACG
TTGGACAAGG TGGAAAACTT TGAATCCGGC TCCGGCATCG GCGTGCGCGG ACAGGTGGCA
GGGCATCAAC TGGCGCTCGG CAATACCACC CTGATGCAGC AGATGGGCAT CCCGGTTGAT
AGCCTGATGC CGCAGGCCGA GGCCCTGCGG GCAGAAGGCG CCAGCGTGAT GCACTTGGCC
GCCGATGGAC GCCTGATCGG TCTGCTGGCT GTTTCCGATC CGATCAAGTC CAGCACGCCC
GAGGCGCTGG CAACGCTGAA AGCGGCCGGC CTGCGTATCG TGATGGCGAC CGGCGACGGC
CTGACCACGG CCAAATCTGT CGGCGCGCGC CTGGGTATTG ACGAGGTGCA TGGCGAGGTC
AAGCCGGCCG ACAAATTGCG GCTGGTCGAG CGCCTGCAGA AGGAAGGCCG CGTGGTGGCG
ATGGCCGGGG ACGGCATCAA CGATGCGCCC GCGCTGGCCC AGGCGGATGT CGGTGTGGCC
ATGGGCACCG GCACCGACGT GGCGATGAAC AGCGCGCAGG TCACGCTGGT CAAGGGTGAT
TTGCGCGGGA TCGCCATCGC GCGTTCGCTG TCGGAAGCCA CGGTGGGCAA CATGAAGCAG
AACCTGATGT TCGCCTTCCT GTACAACGCG GCGGGCATTC CCATCGCTGC CGGTGTGCTG
TACCCGCTGA CCGGCTGGCT GCTGTCGCCG ATGATCGCCG CGCTGGCCAT GAGCTTCAGC
TCGGTGTCGG TGATCGGCAA CGCGCTGCGC CTGCGGCGGA GCCGGTTGTG A
|
|---|
| Protein sequence | MNPHTPSLRS PEPMQPETAD SGHPVMPHAH GAGAAESTSL KDPVCGMPVT ERSAHWHEHE
GRRYYFCSAH CKNKFGADPG RFVTPEPALA PESAAPAGTI YTCPMHSEIR QDHPGNCPKC
GMTLEPLLPE LEDGENAELV DFQRRFWWTL PLTGVVTLMA MFGHRLNWFD MATQSWLELV
LSLPIVLWAG WPFFQRGWQS VVNRSPNMWT LIGLGTGAAF VYSVVATVAP QVFPASFVSM
GRVAVYFEAA AVIISLTLLG QVLELKARSQ TSAAIRSLLG LAPKTARRIR ADGSEEDVPL
NHVHVGDMLR VRPGEKVPVD GVVVEGGSSV DESMLTGEPM PVTKRVGDKV IGATLNTSGA
MVMRSERVGA ATMLAQIVQL VAQAQRSKAP MQRMADVVAG YFVVSVVAVA LLTFFGWGLF
GPEPRWVFGL INAVAVLIIA CPCALGLATP MSIMVATGLG ATRGVLFRDA AAIENLRKID
TLIIDKTGTL TEGRPRFDRA IPAPGFEADE VLRLAASLDQ GSEHPLADAI VAAARERGMT
LDKVENFESG SGIGVRGQVA GHQLALGNTT LMQQMGIPVD SLMPQAEALR AEGASVMHLA
ADGRLIGLLA VSDPIKSSTP EALATLKAAG LRIVMATGDG LTTAKSVGAR LGIDEVHGEV
KPADKLRLVE RLQKEGRVVA MAGDGINDAP ALAQADVGVA MGTGTDVAMN SAQVTLVKGD
LRGIAIARSL SEATVGNMKQ NLMFAFLYNA AGIPIAAGVL YPLTGWLLSP MIAALAMSFS
SVSVIGNALR LRRSRL
|
|---|
| |