| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1160 |
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| Symbol | |
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| ID | 4011994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 1201552 |
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| End bp | 1203186 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637940837 |
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| Product | histidine ammonia-lyase |
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| Protein accession | YP_548009 |
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| Protein GI | 91787057 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2986] Histidine ammonia-lyase |
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| TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.480862 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATCC AGCCAGGCTT CTTAACCTTG ACGCAACTGC GCCAGATCCA CGCAGGCAGC
GAGCCGCTGA CGATAGATCC GTCAGCCACC GCAGGCATTC GTGCCAGCGC CCAGCTCGTC
CAGCAGGCCG CGCAGGGCGG CGCCGCCGTC TATGGCGTGA ACACCGGTTT CGGCAAGCTG
GCCAACCAGC GCATCGCCCA AACCGACTTG AATACCCTGC AGCTCAACCT GTTGCGCTCG
CATGCCGTCG GTGTGGGCGA GCCCATGCCG GAGCGGGTGG TACGGCTGGT CCTGCTGCTC
AAGGCCGCCA GCCTGGCGCG CGGCTTTTCG GGCGTGCGTG AATGTGTCAT CGACCTGCTG
CTGGCCCTGT ACAACCACGG CTTGACGCCG GTGATTCCCT GCCAGGGATC GGTCGGCGCC
TCCGGCGACC TCGCGCCGCT GGCGCATTTG TGCCTCCCAT TGATTGGCGA AGGCGAGGTG
TTTTATCGCG GCGAGCGCCT GCCCGCCGCA GCCGCGCTGC AACAGGCCCC CCTGGCCCCG
ATACAGTTGT CGGCCAAGGA GGGGCTGGCC CTGATCAATG GCACGCAGGT CTCCACCGCA
CTGGCGCTTG ATGCCCTGCT GGCGACCGAG CGCCTGTTCG AAGCCGCCGT GATTTCCGGG
GCGGTCACGC TCGACGCCGC ACGCGGCAGC GACGGCCCGT TTGATCCCCG CATTCACGCC
GTGCGCGGCC AGCCCGGGCA GATCGCCTGT GCCGCTGCCT ACCGCGCGCT GATGGTCGGC
AGCGAGATCC GCCGCTCCCA CCTGGAGGGC GACGACCGGG TGCAGGATCC GTACTGCCTG
CGCTGCCAGC CGCAGGTCAT GGGCGCCTGC CTGGATCAGA TGCGCTATGC CTCGCAGGTG
TTGATGCGTG AAGCCAATGC CGTCACCGAC AACCCGCTGG TGTTCGCCTC CACCCAGGAA
GTTGCCGTGC AAGCGGGGGC CGTGGAACCG GCTTTGCCGG GCCACAGGAG CCGCCCCCTT
GAGGGGGAGG TGGCCACAGG CCACGTCGGG GGGGAGCTTT TGTCAGGCGG CAATTTTCAT
GCGGAACCGG TGGCGCTGGC TGCCGATGCG CTGGCCGTGG TCATTGCGGA AATCGGCGCC
ATCACCGAGC GGCGCATTGC CATGCTGGTC GATACGGTGG TGTCTCGCCT GCCGGCCTTT
CTCACGCCCG AGCCCGGGCT GAATTCGGGT TTCATGATCG TGCACGTGAC GGCCGCCGCG
CTGGCGTCAG AAAACAAGTC GCTGGCCCAT CCGGCCAGTG TGGACAGCCT GCCCACCTCG
GCCAACCAGG AAGACCACGT GAGCATGGCG ACCTTTGCGG CCCGCCGGCT TCAGCCCATG
CTGCGCAACA CGGAGTACAT CGTGGCCATT GAACTGCTGA CGGCGGCCCA GGGGATCGAA
TTTCTGCGGC CGCTGAAAAG CGCTTCTGTA TTGGAAGGTG TGCTGCAACT GGTGCGTTCG
GTATCGCCAG CCATGATGCG CGACCGCAGC CTGGCGCCTG ACATCGGTGC GGTGCATCAA
TTGGTGGCGC AGGGGCGTAT CGGCCTGGCG GGGGAGGCGC AAATTACCGA GCTGACCGCC
TTGCGGCTGG TGTAA
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| Protein sequence | MNIQPGFLTL TQLRQIHAGS EPLTIDPSAT AGIRASAQLV QQAAQGGAAV YGVNTGFGKL
ANQRIAQTDL NTLQLNLLRS HAVGVGEPMP ERVVRLVLLL KAASLARGFS GVRECVIDLL
LALYNHGLTP VIPCQGSVGA SGDLAPLAHL CLPLIGEGEV FYRGERLPAA AALQQAPLAP
IQLSAKEGLA LINGTQVSTA LALDALLATE RLFEAAVISG AVTLDAARGS DGPFDPRIHA
VRGQPGQIAC AAAYRALMVG SEIRRSHLEG DDRVQDPYCL RCQPQVMGAC LDQMRYASQV
LMREANAVTD NPLVFASTQE VAVQAGAVEP ALPGHRSRPL EGEVATGHVG GELLSGGNFH
AEPVALAADA LAVVIAEIGA ITERRIAMLV DTVVSRLPAF LTPEPGLNSG FMIVHVTAAA
LASENKSLAH PASVDSLPTS ANQEDHVSMA TFAARRLQPM LRNTEYIVAI ELLTAAQGIE
FLRPLKSASV LEGVLQLVRS VSPAMMRDRS LAPDIGAVHQ LVAQGRIGLA GEAQITELTA
LRLV
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