| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1158 |
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| Symbol | |
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| ID | 4011992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 1199355 |
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| End bp | 1200236 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637940835 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_548007 |
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| Protein GI | 91787055 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.590027 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATTC GTAAATTTCT GGCCTTGTGG GCATTGGCCT TCGCCACCGT GGTGCCCCTC
GCTTCGCAGG CCCAGCAAGT GGTCCGCGTG GGCTCCAAAA ATTTCACCGA GCAGTTTGTG
CTCGCAGAAA TTTACGCCCA GGCCCTGGAA GCCGCAGGCA TCAAGACCGA GAAAAAGCTC
AATCTGGGTG GCACGCTGAT TGCGCAAAAA GCCATGGAAG AAAAACAGAT CGATTTCTAC
CCCGAGTACA CCGGCACCAT GCTGCTTGCC GTGCTGAAGC AGGAGCCCAT GACGGATCCC
AAGGCCGTCT ATGACAAGGT GAAAGAGGCC TACGCCAAGA TGGGCTTTGC CGTGCTGAAC
CAGTCCAACC TCAACAACGG GTATGTGATG GTCGTCCGTC CGGAGACCGC GCAGAAGTAC
AAGCTGGAAA CCCTCTCGGA TCTGGCGAAG GCTGCCAAGA ACCTGAAGAT CGGCGCCGGC
CCTGAATTTC GCGATCGCAA GGACGGGCTG CCTGGCCTGA AAGCCAAATA CGACATGGTG
TTCGGGGAAG ACCTGCAGAT GGCCATTGGC CTGCGCTACC AGGCGCTCAA GAACGATCAG
ATCCAGGTGG TGAACGGCTA CTCCACGGAC GGCATGATCA GCGCCATGAA ACTGAAGCGG
CTGCGCGACG ACAAAAACCT GTGGCCCCCG TATTTCGTGG TGCCCGTCAT TCGCCGCGAA
GTCCTTGATG CAAACCCCAA AGTTGGTGAT GTCCTGAACC GGGTCAGCGC CCTGCTCGAC
GAAACCACGA TGGCCCAGAT GAACTACCAG GTCGATGGCG AAAAGCTGGA ACCCAAAGAC
GTGGCACGCG ACTTCCTCAA AGCCAAGGGG CTGGTCAAGT AA
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| Protein sequence | MKIRKFLALW ALAFATVVPL ASQAQQVVRV GSKNFTEQFV LAEIYAQALE AAGIKTEKKL
NLGGTLIAQK AMEEKQIDFY PEYTGTMLLA VLKQEPMTDP KAVYDKVKEA YAKMGFAVLN
QSNLNNGYVM VVRPETAQKY KLETLSDLAK AAKNLKIGAG PEFRDRKDGL PGLKAKYDMV
FGEDLQMAIG LRYQALKNDQ IQVVNGYSTD GMISAMKLKR LRDDKNLWPP YFVVPVIRRE
VLDANPKVGD VLNRVSALLD ETTMAQMNYQ VDGEKLEPKD VARDFLKAKG LVK
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