| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1145 |
|---|
| Symbol | pyrB |
|---|
| ID | 4011883 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 1187280 |
|---|
| End bp | 1188242 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637940822 |
|---|
| Product | aspartate carbamoyltransferase catalytic subunit |
|---|
| Protein accession | YP_547994 |
|---|
| Protein GI | 91787042 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
|---|
| TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTGTACC GACGAAACCC ACAACTCAAT AAAAATGGTG AACTGATTCA TCTGCTGTCG
ATCGAGGGCT TGCCCAAGGC CATCCTGACG CAGATTCTGG ACACGGCCGC CAACTTTGTC
AGCGTGAACA ACCGCGAGGT CAAAAAAGTG CCGCTGCTGC GCGGTAAGAG CGTTTTTAAC
CTGTTTTTTG AAAACTCCAC CCGCACCCGA ACCACCTTTG AAATTGCCGC CACGCGCCTG
TCGGCAGACG TGATCAACCT CGATATCGCG CGTTCGTCGG CCTCCAAGGG CGAGTCGCTG
CTGGACACCA TTGCCAACCT GAGCGCCATG GCCGCCGACC TGTTTGTGGT GCGCCACGGC
GAATCCGGTG CGCCCTACCT GATCGCCCAG CATGTCGCTC CGCACGTGCA TGTGATCAAT
GCCGGCGATG GCCGCCATGC CCACCCGACG CAGGGCCTGC TCGACATGTA CACCATCCGC
CACTACAAGA AGGACTTCAG CAACCTGACG GTGGCCATCG TCGGCGACGT GCTGCATTCG
CGCGTGGCGC GCTCTGATAT CCATGCGCTC ACCACGCTGG GTTGCCCCGA GGTCCGCGTG
GTGGGCCCCA AAACGCTGGT GCCCGCCGAC ATGGCGCAGA TGGGCGTGCG CGTCTGCAAC
ACGCTGGAAG AGGGTATCAA GGGCGCTGAC GTGATCATCA TGCTCAGGCT GCAAAACGAA
CGCATGTCGG GCGCCTTGCT GCCCAGCAGC CAGGAGTTCT TCAAGAGCTT CGGCCTGACC
AACGAGAAGC TGCAACTGGC CAAACCCGAT GCCATCGTCA TGCACCCGGG GCCGATCAAC
CGGGGTGTTG AAATTGACTC GGCGGTGGTC GATGGCACGC AGAGCGTCAT CCTGCCGCAG
GTCACGTTCG GTATTGCCGT GCGCATGGCT GTCATGGGCA TCGTTGCAGG GAATGAAGCA
TGA
|
|---|
| Protein sequence | MLYRRNPQLN KNGELIHLLS IEGLPKAILT QILDTAANFV SVNNREVKKV PLLRGKSVFN
LFFENSTRTR TTFEIAATRL SADVINLDIA RSSASKGESL LDTIANLSAM AADLFVVRHG
ESGAPYLIAQ HVAPHVHVIN AGDGRHAHPT QGLLDMYTIR HYKKDFSNLT VAIVGDVLHS
RVARSDIHAL TTLGCPEVRV VGPKTLVPAD MAQMGVRVCN TLEEGIKGAD VIIMLRLQNE
RMSGALLPSS QEFFKSFGLT NEKLQLAKPD AIVMHPGPIN RGVEIDSAVV DGTQSVILPQ
VTFGIAVRMA VMGIVAGNEA
|
|---|
| |