| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1134 |
|---|
| Symbol | |
|---|
| ID | 4011872 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 1172806 |
|---|
| End bp | 1173813 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637940812 |
|---|
| Product | putative phosphomethylpyrimidine kinase |
|---|
| Protein accession | YP_547984 |
|---|
| Protein GI | 91787032 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
|---|
| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.732932 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.260377 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCGTT GCTTATTCGC GTACAAGGCA AAATCGCAGC CTATGGCAAA CCCCAACACC
TCTTCACTGG ACAGCCGGCA ACTGCAAACC GAGGACAGCG ACGCGTCTCC GGCATGCGTC
ATGACCTTCA ATGCCAATGA TCCGAGCGGA GCAGGTGGAC TGACGGCCGA CATCGCAGCG
ATCACCTCGG CGGGGGCTCA TCCACTGGCT GTCGTCACCG GCGCGTACGT GCGCGACACC
GCCGAGATTT TTGACCATTT CTCATTCGAC GAAGAGGCTG TCACCGACCA GGCGCGATCC
GCACTCGAAG ACATGCCGGT GTCGGCCATC AAGGTCGGTT TTGTCGGCAG CCCGGAGAAC
ATCAGCACCA TCGCCGAGAT CGCGACCGAC TATGCCGATG TACCGCTTAT CGCTTACATG
CCCAACCTGT CATGGTGGGA CGAAAGCGAA ATTGACAGCT ACCTCGATGC CTTTCGTGAG
TTGATGCTGC CGCAGACGAC AGTGTTGGTC GGCAACCACA GCAGCCTGTG GCGCTGGTTG
CTGCCGGACT GGCCGGGCGA GCGCAACCCC TCGGCTCGCG ACATTGCCAA GGCTGCGGCC
GACCTGGGCG TGCCCTACAC GCTGGTGACC GGCATTCCCC TGCCCGACCA GTTCATCGAC
AACGTGCTGG CGACTCCGCA AGCCGTTTTG TACAGTGAAA AATTCGAGCG CTTTGAGGCG
GTATTTGCCG GCGCCGGCGA AACGCTGTCT GCCGCACTCT CGGCCCTGCT GGCCAATGGC
CACGATCTGC AGGCGGCCAC CGCCGAAGCC CTGACCTATC TGGACCACAG CCTGGATGCC
GGTTTTCACC CCGGCATGGG CAACATCGTG CCTGACCGCC TGTTCTGGGC GCAGGCCGAT
GTCGATGATG AAGAATCCGA AGACGAAGCG GGCGACACGC CCGACGATGC CGCACTGACA
TCCAAGCCTC CTTTTGACCT GCCGCCCAAT GGAACCACAA AACATTAA
|
|---|
| Protein sequence | MRRCLFAYKA KSQPMANPNT SSLDSRQLQT EDSDASPACV MTFNANDPSG AGGLTADIAA
ITSAGAHPLA VVTGAYVRDT AEIFDHFSFD EEAVTDQARS ALEDMPVSAI KVGFVGSPEN
ISTIAEIATD YADVPLIAYM PNLSWWDESE IDSYLDAFRE LMLPQTTVLV GNHSSLWRWL
LPDWPGERNP SARDIAKAAA DLGVPYTLVT GIPLPDQFID NVLATPQAVL YSEKFERFEA
VFAGAGETLS AALSALLANG HDLQAATAEA LTYLDHSLDA GFHPGMGNIV PDRLFWAQAD
VDDEESEDEA GDTPDDAALT SKPPFDLPPN GTTKH
|
|---|
| |