| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1114 |
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| Symbol | |
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| ID | 4011948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 1148383 |
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| End bp | 1149741 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637940791 |
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| Product | signal recognition particle subunit FFH/SRP54 (srp54) |
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| Protein accession | YP_547964 |
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| Protein GI | 91787012 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTCAG CCCTTACCGA CAAACTCTCC CGCCTCGTCA AGGAAATGCG AGGCCAGGCC
CGCATCACCG AATCCAATGT GCAGGACATG TTGCGCGAGG TGCGCATGGC GCTGCTCGAA
GCCGACGTGG CCCTGCCGGT GGTGCGCGAC TTCATCGCCC GCGTCAAGGA CAAGGCCCTT
GGCCAGGAGG TGATGGGTTC GCTGTCTCCC GGCCAGGCCC TGGTGGGCAT CGTCAACCGC
GAGCTGGCGG CGACCATGGG CGAGGGCGTC AGCGACATCA ACCTGGCGGC GCAACCGCCC
GCGGTGATCC TGATGGCCGG CCTGCAGGGC GCGGGCAAGA CCACCACCAC GGCCAAGCTG
GCCAAGCACC TGATTGAAAA GCGCAAGAAA AAAGTCCTGA CGGTGTCCGG CGACGTCTAC
CGGCCTGCCG CCATAGAGCA GCTCAAGACC GTGACGGCGC AGGCCGGTGC CGAATGGTTC
CCGAGCACGC CCGACCAGAA GCCCGTCGAC ATTGCCAAGG CCGCGATCGA CTACGCACGC
AGGCATTTCT TTGACGTGCT GCTCGTCGAC ACGGCCGGCC GCCTGGCCAT TGACGAAGCC
CTGATGAAGG AAATCAGGGA GTTGCACGCG GCGCTCAACC CGGTTGAAAC GCTGTTCGTC
GTCGATGCCA TGCAGGGGCA GGACGCGGTC AACACGGCCA AGGCCTTCAA GGAAGCGTTG
CCGCTGACCG GCATCATTCT GACCAAGACT GACGGCGACT CGCGCGGCGG TGCGGCCCTG
AGCGTGCGGC AGATCACCGG CGCACCGATC AAGTTCTCCG GCACCAGCGA GAAAATCGAC
GGCCTGGAGG TGTTTGATGC CGAGCGGCAT GCCGGCCGCA TCCTGGGCAT GGGTGACATC
GTCGCGCTGG TCGAACAGGT CGCGGCAGGC GTTGATGTGG CTGCGGCGCA AAAGCTGGCC
GCCAAGATCA AGTCGGGCGA TGGTTTTGAC CTGAATGATT TCCTGAGCCA GCTCCAGCAG
ATGAAAAACA TGGGCGGCTT GTCCAGCCTG CTCGAGAAGC TGCCGGCGCA GATGGCTGCC
AAGGCCGGTC AGGTGGACAT GGACAAGGCT GAACGCGACA TCAAGCGCAA GGAAGGCATC
ATCCAGAGCA TGACGCCGCT GGAGCGCCGC AAGCCCGAAC TCATCAAGGC CACCCGCAAG
CGCCGCATCG CGGCCGGCTC GGGCGTGCAG GTTCAGGAGG TCAACCGCCT GCTCAACGAG
TTTGAGCAGA TGCAGGGCAT GATGAAAAAG ATGAAGGGCA GCGGCATGAT GAAGATGATG
AAGCGCATGG GCGGCATGAA GGGCATGCCG AAGTTCTGA
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| Protein sequence | MASALTDKLS RLVKEMRGQA RITESNVQDM LREVRMALLE ADVALPVVRD FIARVKDKAL
GQEVMGSLSP GQALVGIVNR ELAATMGEGV SDINLAAQPP AVILMAGLQG AGKTTTTAKL
AKHLIEKRKK KVLTVSGDVY RPAAIEQLKT VTAQAGAEWF PSTPDQKPVD IAKAAIDYAR
RHFFDVLLVD TAGRLAIDEA LMKEIRELHA ALNPVETLFV VDAMQGQDAV NTAKAFKEAL
PLTGIILTKT DGDSRGGAAL SVRQITGAPI KFSGTSEKID GLEVFDAERH AGRILGMGDI
VALVEQVAAG VDVAAAQKLA AKIKSGDGFD LNDFLSQLQQ MKNMGGLSSL LEKLPAQMAA
KAGQVDMDKA ERDIKRKEGI IQSMTPLERR KPELIKATRK RRIAAGSGVQ VQEVNRLLNE
FEQMQGMMKK MKGSGMMKMM KRMGGMKGMP KF
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