| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1081 |
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| Symbol | lpxC |
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| ID | 4012088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 1115028 |
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| End bp | 1115951 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637940758 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
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| Protein accession | YP_547931 |
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| Protein GI | 91786979 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000019397 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.333017 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGCCC AAAGAACACT CAAATCCCTG ACCAAGGCCG TGGGCGTGGG CCTGCACAGC
GGCCAGCGGG TGGAGTTGAC CTTGCGGCCG GCGCCGCCGG ATACCGGCAT TGTGTTTCGG
CGGGTGGATT TGCCGCAGCC GGTGGATATC GTCATCTCGG CGCAGGCCGT GACCGACACC
CGGCTGGCGT CGACCATCTC GGCCGGTGGC GCCAAGGTGC ACACTGTCGA GCACCTGATG
TCGGCCTGCG CCGGCCTGGG CATCGACAAC CTGTACATCG ACATCACCGC GGAAGAGGTG
CCCATTCTGG ATGGTTCGGC CTCTTCATTC GTCTTCCTGC TGCAGTCCGC CGGCATCGAG
CTGCAGTCCG CGCCCAAGCG ATTCATTCGC GTGCTCAAGC CGGTCGAGGT GCGCGAGGGC
GAAGGCGCCA CGGCCAAGTG GGCGCGCCTG AGTCCCTACG AGGGCTACAA GCTGAGTTTT
GAAATTGACT TCGACCATCC GGCCGTCGAC TCCACCGGCC AGCGCGTGGA GTTTGACCTG
AGTTCAGGTT CCTATTCGCG AGACATCGCC CGCGCCCGCA CCTTCGGCTT TACAAAAGAC
GTCGAAATGA TGCGCGCCAA CGGGCTGGCC CTGGGCGGCG GGCTCGACAA TGCCATCGTC
ATGGACGACT ACAAGGTGCT CAACAGCGAG GGCCTGCGCT ACAACGACGA GTTCGTGAAG
CACAAGATCC TCGACGCCAT GGGCGACCTG TACCTGTTGG GCAAACCGCT GCTGGCGGCC
TACAGCGCCT TTCGCTCCGG CCATGCGATG AACAACAAGC TGTTGCGTGA GCTGCTGGCC
CACCAGGACG CTTACGAAGT CGTCACCTTT GCAGACGAAA AACGGGCTCC TCAGGGCTTT
GCCACCCTGG CGCGCGCCTG GTAG
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| Protein sequence | MLAQRTLKSL TKAVGVGLHS GQRVELTLRP APPDTGIVFR RVDLPQPVDI VISAQAVTDT
RLASTISAGG AKVHTVEHLM SACAGLGIDN LYIDITAEEV PILDGSASSF VFLLQSAGIE
LQSAPKRFIR VLKPVEVREG EGATAKWARL SPYEGYKLSF EIDFDHPAVD STGQRVEFDL
SSGSYSRDIA RARTFGFTKD VEMMRANGLA LGGGLDNAIV MDDYKVLNSE GLRYNDEFVK
HKILDAMGDL YLLGKPLLAA YSAFRSGHAM NNKLLRELLA HQDAYEVVTF ADEKRAPQGF
ATLARAW
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