Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_1073 |
Symbol | |
ID | 4012060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 1104707 |
End bp | 1106470 |
Gene Length | 1764 bp |
Protein Length | 587 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637940750 |
Product | UDP-N-acetylmuramoylalanine--D-glutamate ligase |
Protein accession | YP_547923 |
Protein GI | 91786971 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.312331 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.927844 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGCATT TACAAGACCA AACCGTGTTG ATCCTGGGCC TGGGTGCGTC CGGCCTGGCC ATGGCGCGCT GGTGGGTCCG CCATGGGGCA TCGGTGACGG TTGCCGACAC ACGCGAAGCG CCTGCATTGC TCGCGACGCT GCGGCAGGAA CTTCCCGCGG TGAAGTTTGT GAGCGGCGCC TTTACGCCGG ACCTCGTGCA GGGTAGCGCC GTGCGCGCGG TCTATCGCTC GCCAGGACTG GCGCCTGCAG TGATCGCTCC TGTGGTTGAT GCCGCGCGCG CCATGGGCTT GCCTGTCGGG GGCGAACTAG ACCTGTTTTC CCGGGCCCTG GCCGATCTCC GCGAGGTGTC GGCAACGGAG GTGGTGAAAG ATCATCTCGT GCCTCCTGAA TCGCCATTGT CCGATGCATC CGATATATCC GATGCATCAG ATGCAACGGA TGCGGTGGAC TCGCTTGAGG GCGAAGCCGC TTTGGCGGCT GATGCCTCCG GCGATATCGA AGAGATGTCC GCCTCGGATG TTGTGGAAGG CGCGCCTGTC TCGGAGGATG CCGGCGAAGA CGCGGCGTTG CCCGCTCTGC TTGCCCCCGC GCCGGCCGAA CAGGCTGCTG GCTATAGGCC GGTGGTGTTG GCCATCACGG GAACCAACGG CAAAACCACG GTAACTTCCC TGGTCGGCCA ACTGGTGCAA CGGGCCGGAA AAACCGTTGC CGTTGCAGGC AATATCGGCC CGACGCTGCT CGATACGCTG TCTGCGCACC TTGACGCGGA TACCCTGCCG CAGGTGTGGG TGCTGGAACT GTCCAGCTTC CAGCTCGCGG ACGCGCAGGA CTTTGAGCCG ACGGCTGCCG TGGTGTTGAA TGTGACCCAG GATCATCTGG ACTGGCACGG CGACATGGAT GCTTACGTCG CGGCCAAGGC CCGGATATTT GGACGCAGCA CGTTCATGCT GCTTAACCGT GACGATCCCC GGGTGATGGA GATGCTTCCG ACGCCCGTCA AGGTACGCCT GCGGCCTCCG CAGGTTCGCC CGCATTCGAC TTTTGGTGCC GGGGAGCCAC AACGACCCGG CGACTACGGC ATCGAAACCG TCAATGGCAT GGCGTGGCTG GTGCGCGCCG CGCAAGCCGA TGAAACCATC AAACGCCGCA AGGGTGAAGA AGTGGAGCTG CACATCCAGC GCCTGATGCC GCTGGATGCC CTGCGCATTC GCGGCCGCCA CAACGCCACC AATGCACTGG CCGCGCTCGG ACTGGCCGTC GCGGCCGGTT GCAGTCTTGC GCCCATGTTG CATGGCCTGC GCGAGTACCG GGGCGAGCCG CACCGCGTGG AATCCATCGC GGTGGTGAAC GATGTCGAAT ATTTCGACGA CAGCAAGGGA ACCAACGTCG GCGCCACCGC GGCAGCCCTG GCGGGTCTGG GGGCCGAACG CAAGCTGGTG GTGATTCTGG GCGGCGAAGG CAAGGGGCAG GATTTTTCAC CGCTGGCGGA ACCCGTGTCA CACCATGCCC GGGCCGTGGT GCTGATAGGC AAGGACGCGC CCCTCATCCG GTCTGCGCTG CAGGCCAGCC AGGTGGCGCT GCTGGACGCC GCGTCGATGC AGGAGGCGGT GAGCCTGGCG GCCGCGCAGG CCCATACCGG CGATGCCGTC CTGATGTCGC CCGCCTGCGC CAGTTTTGAC ATGTTTGACA ACTACGAACA CCGCGCCCAG GTCTTTTGTG ATGCGGTGCA GGCGCTGGCC CAGGAACAGG GGGTGGTGCT GTGA
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Protein sequence | MRHLQDQTVL ILGLGASGLA MARWWVRHGA SVTVADTREA PALLATLRQE LPAVKFVSGA FTPDLVQGSA VRAVYRSPGL APAVIAPVVD AARAMGLPVG GELDLFSRAL ADLREVSATE VVKDHLVPPE SPLSDASDIS DASDATDAVD SLEGEAALAA DASGDIEEMS ASDVVEGAPV SEDAGEDAAL PALLAPAPAE QAAGYRPVVL AITGTNGKTT VTSLVGQLVQ RAGKTVAVAG NIGPTLLDTL SAHLDADTLP QVWVLELSSF QLADAQDFEP TAAVVLNVTQ DHLDWHGDMD AYVAAKARIF GRSTFMLLNR DDPRVMEMLP TPVKVRLRPP QVRPHSTFGA GEPQRPGDYG IETVNGMAWL VRAAQADETI KRRKGEEVEL HIQRLMPLDA LRIRGRHNAT NALAALGLAV AAGCSLAPML HGLREYRGEP HRVESIAVVN DVEYFDDSKG TNVGATAAAL AGLGAERKLV VILGGEGKGQ DFSPLAEPVS HHARAVVLIG KDAPLIRSAL QASQVALLDA ASMQEAVSLA AAQAHTGDAV LMSPACASFD MFDNYEHRAQ VFCDAVQALA QEQGVVL
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