Gene Bpro_1073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_1073 
Symbol 
ID4012060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp1104707 
End bp1106470 
Gene Length1764 bp 
Protein Length587 aa 
Translation table11 
GC content65% 
IMG OID637940750 
ProductUDP-N-acetylmuramoylalanine--D-glutamate ligase 
Protein accessionYP_547923 
Protein GI91786971 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase 
TIGRFAM ID[TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.312331 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.927844 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCATT TACAAGACCA AACCGTGTTG ATCCTGGGCC TGGGTGCGTC CGGCCTGGCC 
ATGGCGCGCT GGTGGGTCCG CCATGGGGCA TCGGTGACGG TTGCCGACAC ACGCGAAGCG
CCTGCATTGC TCGCGACGCT GCGGCAGGAA CTTCCCGCGG TGAAGTTTGT GAGCGGCGCC
TTTACGCCGG ACCTCGTGCA GGGTAGCGCC GTGCGCGCGG TCTATCGCTC GCCAGGACTG
GCGCCTGCAG TGATCGCTCC TGTGGTTGAT GCCGCGCGCG CCATGGGCTT GCCTGTCGGG
GGCGAACTAG ACCTGTTTTC CCGGGCCCTG GCCGATCTCC GCGAGGTGTC GGCAACGGAG
GTGGTGAAAG ATCATCTCGT GCCTCCTGAA TCGCCATTGT CCGATGCATC CGATATATCC
GATGCATCAG ATGCAACGGA TGCGGTGGAC TCGCTTGAGG GCGAAGCCGC TTTGGCGGCT
GATGCCTCCG GCGATATCGA AGAGATGTCC GCCTCGGATG TTGTGGAAGG CGCGCCTGTC
TCGGAGGATG CCGGCGAAGA CGCGGCGTTG CCCGCTCTGC TTGCCCCCGC GCCGGCCGAA
CAGGCTGCTG GCTATAGGCC GGTGGTGTTG GCCATCACGG GAACCAACGG CAAAACCACG
GTAACTTCCC TGGTCGGCCA ACTGGTGCAA CGGGCCGGAA AAACCGTTGC CGTTGCAGGC
AATATCGGCC CGACGCTGCT CGATACGCTG TCTGCGCACC TTGACGCGGA TACCCTGCCG
CAGGTGTGGG TGCTGGAACT GTCCAGCTTC CAGCTCGCGG ACGCGCAGGA CTTTGAGCCG
ACGGCTGCCG TGGTGTTGAA TGTGACCCAG GATCATCTGG ACTGGCACGG CGACATGGAT
GCTTACGTCG CGGCCAAGGC CCGGATATTT GGACGCAGCA CGTTCATGCT GCTTAACCGT
GACGATCCCC GGGTGATGGA GATGCTTCCG ACGCCCGTCA AGGTACGCCT GCGGCCTCCG
CAGGTTCGCC CGCATTCGAC TTTTGGTGCC GGGGAGCCAC AACGACCCGG CGACTACGGC
ATCGAAACCG TCAATGGCAT GGCGTGGCTG GTGCGCGCCG CGCAAGCCGA TGAAACCATC
AAACGCCGCA AGGGTGAAGA AGTGGAGCTG CACATCCAGC GCCTGATGCC GCTGGATGCC
CTGCGCATTC GCGGCCGCCA CAACGCCACC AATGCACTGG CCGCGCTCGG ACTGGCCGTC
GCGGCCGGTT GCAGTCTTGC GCCCATGTTG CATGGCCTGC GCGAGTACCG GGGCGAGCCG
CACCGCGTGG AATCCATCGC GGTGGTGAAC GATGTCGAAT ATTTCGACGA CAGCAAGGGA
ACCAACGTCG GCGCCACCGC GGCAGCCCTG GCGGGTCTGG GGGCCGAACG CAAGCTGGTG
GTGATTCTGG GCGGCGAAGG CAAGGGGCAG GATTTTTCAC CGCTGGCGGA ACCCGTGTCA
CACCATGCCC GGGCCGTGGT GCTGATAGGC AAGGACGCGC CCCTCATCCG GTCTGCGCTG
CAGGCCAGCC AGGTGGCGCT GCTGGACGCC GCGTCGATGC AGGAGGCGGT GAGCCTGGCG
GCCGCGCAGG CCCATACCGG CGATGCCGTC CTGATGTCGC CCGCCTGCGC CAGTTTTGAC
ATGTTTGACA ACTACGAACA CCGCGCCCAG GTCTTTTGTG ATGCGGTGCA GGCGCTGGCC
CAGGAACAGG GGGTGGTGCT GTGA
 
Protein sequence
MRHLQDQTVL ILGLGASGLA MARWWVRHGA SVTVADTREA PALLATLRQE LPAVKFVSGA 
FTPDLVQGSA VRAVYRSPGL APAVIAPVVD AARAMGLPVG GELDLFSRAL ADLREVSATE
VVKDHLVPPE SPLSDASDIS DASDATDAVD SLEGEAALAA DASGDIEEMS ASDVVEGAPV
SEDAGEDAAL PALLAPAPAE QAAGYRPVVL AITGTNGKTT VTSLVGQLVQ RAGKTVAVAG
NIGPTLLDTL SAHLDADTLP QVWVLELSSF QLADAQDFEP TAAVVLNVTQ DHLDWHGDMD
AYVAAKARIF GRSTFMLLNR DDPRVMEMLP TPVKVRLRPP QVRPHSTFGA GEPQRPGDYG
IETVNGMAWL VRAAQADETI KRRKGEEVEL HIQRLMPLDA LRIRGRHNAT NALAALGLAV
AAGCSLAPML HGLREYRGEP HRVESIAVVN DVEYFDDSKG TNVGATAAAL AGLGAERKLV
VILGGEGKGQ DFSPLAEPVS HHARAVVLIG KDAPLIRSAL QASQVALLDA ASMQEAVSLA
AAQAHTGDAV LMSPACASFD MFDNYEHRAQ VFCDAVQALA QEQGVVL