Gene Bpro_1071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_1071 
Symbol 
ID4012058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp1102067 
End bp1103446 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content66% 
IMG OID637940748 
ProductUDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 
Protein accessionYP_547921 
Protein GI91786969 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0770] UDP-N-acetylmuramyl pentapeptide synthase 
TIGRFAM ID[TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.137605 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACCT TGCAACAAGC CCTGGGCTGG TTGCCGTCGG CCCGGCTAGT GGGTGATGGC 
AGCGTGAAGC CTCTGCGCGT GCACACCGAT ACCCGCAGCC TGCAGGCCGG CGACCTGTTC
GTGGCGCTCA AGGGCGAGCG CTTTGACGCC CATGATTTTC TGGCGCAGGC CAAGGCACAG
GGCGCCGTGG CGGCGATTGC CCACCATGGC CTGGCCGCGG CAGGTCTGCC GGGTCTGGAG
GTGGCTGACT CGAAACTGGC GCTCGGCCAA CTGGCGGCCG GCTGGCGTTC GCAATTCAGC
TTGCCCCTCA TTGCGGTGAC GGGAAGCAAC GGAAAAACGA CGGTGACGCA GATGATCGCG
GCTATCCTGC GGGCCTGGAA ATCCACGCAG GCTTTTGCCA CGGAAGGCAA TCTCAACAAC
GACATCGGCG TGCCCCTGAC GCTGTTGCGC CTTCGTGCCT CCCATGCGGT GGGCGTGGTG
GAGCTGGGCA TGAACCATCC CGGCGAAATC GCCTACCTGG CCGCCTTGGC CAAGCCTGGC
GTGGCGCTGG TCAATAACGC CCAGCGCGAG CACCTTGAAT TCATGGCCAC GGTGGAAGCC
GTCGCCCGGG AGAACGGCTC CGTGCTGCAG GCCCTCGGCA CGGATGGCAT TGCCGTTTTT
CCTGCCGATG ATGACTACAC CGCCATCTGG CGCGGCCTCG CGGGGGCGCG CCGCGTACTG
ACTTTTGCAC AAACGGGCCC GGCCGATGTC ACGGCCCAGG CGCAGTGGAG CGGCGACTGC
TGGCAGGTTG CGGCCCGGAC ACCCGCAGGG CCGCTTGATT TTCCCCTGCA TATTGCGGGC
CGGCACAACG TCAAGAATGC GCTGGCCGCC ACCGCCTGCG CGCTGGCCGC CGGCGTTCCC
CTGCCAGTCA TCGCGGCGGG TCTATCGGAA TTTGCCCCGG TCAAGGGACG TTCCCGCGCC
CTGACCGTGC GCCTGGCGAA TCGTGTGGTG ACATTGATCG ACGACACCTA CAACGCCAAT
CCCGACTCCA TGCGCGCGGC CATCGAGGTG TTGGCCGAGC TGCCGGCGCC GCGCCTGCTG
GTCATGGGCG ACATGGGTGA GGTGGGCGAC CAGGGTCCCC AGTTTCACGA AGAGGCCGGC
CGGTATGCCC ACGCGCGGGG CATCGAGCAG CTGTTCACGC TGGGAGCCCA GTCCCAAAGG
GCGAGTACCG CTTTCGGCGC GGGACGCCAT TTCAGCCAGA TGGCCGATCT GGCCGCCGCC
GTGGTGGCTG AATTGCCGCA GGCGGGCAGT GTGCTGGTGA AGGGCTCCCG CTTCATGAAG
ATGGAGCAGG TGGTTCAGGT CATCGCAGAT CACACAAAAA ACTACAAGGA AGAAACATGA
 
Protein sequence
MMTLQQALGW LPSARLVGDG SVKPLRVHTD TRSLQAGDLF VALKGERFDA HDFLAQAKAQ 
GAVAAIAHHG LAAAGLPGLE VADSKLALGQ LAAGWRSQFS LPLIAVTGSN GKTTVTQMIA
AILRAWKSTQ AFATEGNLNN DIGVPLTLLR LRASHAVGVV ELGMNHPGEI AYLAALAKPG
VALVNNAQRE HLEFMATVEA VARENGSVLQ ALGTDGIAVF PADDDYTAIW RGLAGARRVL
TFAQTGPADV TAQAQWSGDC WQVAARTPAG PLDFPLHIAG RHNVKNALAA TACALAAGVP
LPVIAAGLSE FAPVKGRSRA LTVRLANRVV TLIDDTYNAN PDSMRAAIEV LAELPAPRLL
VMGDMGEVGD QGPQFHEEAG RYAHARGIEQ LFTLGAQSQR ASTAFGAGRH FSQMADLAAA
VVAELPQAGS VLVKGSRFMK MEQVVQVIAD HTKNYKEET