Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_1071 |
Symbol | |
ID | 4012058 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 1102067 |
End bp | 1103446 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637940748 |
Product | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase |
Protein accession | YP_547921 |
Protein GI | 91786969 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.137605 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGACCT TGCAACAAGC CCTGGGCTGG TTGCCGTCGG CCCGGCTAGT GGGTGATGGC AGCGTGAAGC CTCTGCGCGT GCACACCGAT ACCCGCAGCC TGCAGGCCGG CGACCTGTTC GTGGCGCTCA AGGGCGAGCG CTTTGACGCC CATGATTTTC TGGCGCAGGC CAAGGCACAG GGCGCCGTGG CGGCGATTGC CCACCATGGC CTGGCCGCGG CAGGTCTGCC GGGTCTGGAG GTGGCTGACT CGAAACTGGC GCTCGGCCAA CTGGCGGCCG GCTGGCGTTC GCAATTCAGC TTGCCCCTCA TTGCGGTGAC GGGAAGCAAC GGAAAAACGA CGGTGACGCA GATGATCGCG GCTATCCTGC GGGCCTGGAA ATCCACGCAG GCTTTTGCCA CGGAAGGCAA TCTCAACAAC GACATCGGCG TGCCCCTGAC GCTGTTGCGC CTTCGTGCCT CCCATGCGGT GGGCGTGGTG GAGCTGGGCA TGAACCATCC CGGCGAAATC GCCTACCTGG CCGCCTTGGC CAAGCCTGGC GTGGCGCTGG TCAATAACGC CCAGCGCGAG CACCTTGAAT TCATGGCCAC GGTGGAAGCC GTCGCCCGGG AGAACGGCTC CGTGCTGCAG GCCCTCGGCA CGGATGGCAT TGCCGTTTTT CCTGCCGATG ATGACTACAC CGCCATCTGG CGCGGCCTCG CGGGGGCGCG CCGCGTACTG ACTTTTGCAC AAACGGGCCC GGCCGATGTC ACGGCCCAGG CGCAGTGGAG CGGCGACTGC TGGCAGGTTG CGGCCCGGAC ACCCGCAGGG CCGCTTGATT TTCCCCTGCA TATTGCGGGC CGGCACAACG TCAAGAATGC GCTGGCCGCC ACCGCCTGCG CGCTGGCCGC CGGCGTTCCC CTGCCAGTCA TCGCGGCGGG TCTATCGGAA TTTGCCCCGG TCAAGGGACG TTCCCGCGCC CTGACCGTGC GCCTGGCGAA TCGTGTGGTG ACATTGATCG ACGACACCTA CAACGCCAAT CCCGACTCCA TGCGCGCGGC CATCGAGGTG TTGGCCGAGC TGCCGGCGCC GCGCCTGCTG GTCATGGGCG ACATGGGTGA GGTGGGCGAC CAGGGTCCCC AGTTTCACGA AGAGGCCGGC CGGTATGCCC ACGCGCGGGG CATCGAGCAG CTGTTCACGC TGGGAGCCCA GTCCCAAAGG GCGAGTACCG CTTTCGGCGC GGGACGCCAT TTCAGCCAGA TGGCCGATCT GGCCGCCGCC GTGGTGGCTG AATTGCCGCA GGCGGGCAGT GTGCTGGTGA AGGGCTCCCG CTTCATGAAG ATGGAGCAGG TGGTTCAGGT CATCGCAGAT CACACAAAAA ACTACAAGGA AGAAACATGA
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Protein sequence | MMTLQQALGW LPSARLVGDG SVKPLRVHTD TRSLQAGDLF VALKGERFDA HDFLAQAKAQ GAVAAIAHHG LAAAGLPGLE VADSKLALGQ LAAGWRSQFS LPLIAVTGSN GKTTVTQMIA AILRAWKSTQ AFATEGNLNN DIGVPLTLLR LRASHAVGVV ELGMNHPGEI AYLAALAKPG VALVNNAQRE HLEFMATVEA VARENGSVLQ ALGTDGIAVF PADDDYTAIW RGLAGARRVL TFAQTGPADV TAQAQWSGDC WQVAARTPAG PLDFPLHIAG RHNVKNALAA TACALAAGVP LPVIAAGLSE FAPVKGRSRA LTVRLANRVV TLIDDTYNAN PDSMRAAIEV LAELPAPRLL VMGDMGEVGD QGPQFHEEAG RYAHARGIEQ LFTLGAQSQR ASTAFGAGRH FSQMADLAAA VVAELPQAGS VLVKGSRFMK MEQVVQVIAD HTKNYKEET
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