Gene Bpro_1045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_1045 
Symbol 
ID4012263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp1072117 
End bp1072896 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content65% 
IMG OID637940723 
ProductABC transporter related 
Protein accessionYP_547896 
Protein GI91786944 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.162928 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.159703 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAAC TGTCCATTCA AGGGGTGTCG CGCGTTTTCG AAACCGCCAA GGGCCAGCGC 
ACGCAGGCGC TGCTGCCGGT CGATTTCGAA GTGAACGACA ACGACTTCGT CACCATCCTC
GGCCCCTCGG GCTGCGGCAA GTCCACGCTG CTGCGCATCG TCGCGGGGCT GGAGCGGCCC
AGCACGGGCC GGGCCATCCT CGACGGCCGC CCGGTCGAAG GCCCGGGCGC CGACCGCGGC
ATGGTGTTTC AGAGCTACAC GCTGTTCCCG TGGCTGACCG TCGCGCAGAA CATCCGCTTT
GGCCTGCGCG AGCGCGGCAT GAGCGAGGCC GACCAGAAGG ACCGCAGCGC CTACTTCATG
GCCAAGGTGG GCCTGCGCGG TTTTGAAAAC CACTTTCCCA AGCAGCTCTC CGGCGGCATG
CAGCAGCGCA CGGCGATTGC ACGGGCGCTG GCCAACGACC CCAAGATCCT GCTGCTCGAC
GAGCCCTTTG GCGCACTCGA CAACCAGACC CGCGTGCTGA TGCAGGAACT GCTGCTGGGT
ATCTGGGAGT CGGCGCGCAA GACGGTGCTG TTCGTCACAC ACGACATCGA CGAAGCGATC
TTCATGGCCA ACCGGGTGGC GGTGTTCAGC GCGCGCCCGG GACGCATCAA GTCCGACATT
GCGGTGAACC TGCCGCATCC GCGGCACTAT ACGATCAAGA CCTCGCCGGA GTTCATGGAA
CTCAAGGCGC GCCTGACCGA AGAGATTCGC GCCGAGTCGA TGGCGTCCGC CGAACATTGA
 
Protein sequence
MSQLSIQGVS RVFETAKGQR TQALLPVDFE VNDNDFVTIL GPSGCGKSTL LRIVAGLERP 
STGRAILDGR PVEGPGADRG MVFQSYTLFP WLTVAQNIRF GLRERGMSEA DQKDRSAYFM
AKVGLRGFEN HFPKQLSGGM QQRTAIARAL ANDPKILLLD EPFGALDNQT RVLMQELLLG
IWESARKTVL FVTHDIDEAI FMANRVAVFS ARPGRIKSDI AVNLPHPRHY TIKTSPEFME
LKARLTEEIR AESMASAEH