Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_1043 |
Symbol | |
ID | 4012261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 1069620 |
End bp | 1071164 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637940721 |
Product | histidine ammonia-lyase |
Protein accession | YP_547894 |
Protein GI | 91786942 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2986] Histidine ammonia-lyase |
TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.693412 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.100833 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAACAT CCACCCACAT CCTGCACCCC GGCCGCGTCA GCCTGGCCCT GTTGCGCAGC ATCCATGCCG GCGGCGTGCA GCTGGCCCTG GCGCCCGAGG CCCGTGCCGG CCTGCTGGCA GCCCAGGCCA CCGTGCAGCG CATCGTCGAT GAAGACCAGG TCGTCTACGG CATCAACACC GGCTTCGGCA AACTGGCCAG CACCAAGATT GCGCCCAACC GCCTGGTCGA ATTACAGCGC AACCTGGTGC TGTCGCACAG CGTGGGCACC GGCGAGCCGC TACCGGCCGC CGTGGTGCGC GTGATCCTCG CTACCAAGGC GGTGAGCCTG GCGCGCGGCC ACTCCGGCGT GCGGCCCGAA CTGGTGGACG CCTTGCTGGC GCTGGCCAAC GCGGGCGTGA TGCCGCGCAT CCCGGCCAAG GGCTCCGTGG GTGCCTCCGG CGACCTGGCG CCTCTGGCGC ACCTGGCCTG CGTGCTGATC GGCGAAGGCC AGGCCACCAC CGCCGACGGC GAAGTCATTT CCGGCGCCCA GGCCATGCGC CGCATCGGCG TGGCGCCGTT TGTGCTCGGC CCCAAGGAAG GCCTGGCGCT GCTCAACGGC ACCCAGGTGT CTACCGCCCT GGCGCTGGCC GGCCTGTTCG GCGCCGAACA GGTATTTGCC GCGGGCCTGG TGTCCGGCGC CTTGTCGCTG GAAGCCGTGC AGGGCTCCAT CAAGCCGTTT GACGCGCGGG TGCATGCCGC GCGTGGCCAG CCCGGCCAGA TGGCCGTGGC GGCGGCGGTG CGCACCCTGC TCGAAGGCAG CGAGATCGTG CCGTCGCACC CCGACTGCGG CCGCGTGCAG GACCCGTATT CGATCCGCTG CGTGCCCCAA GTCATGGGCG CCTGCCTGGA CAACCTGCAG CACGCCGCCC GGGTGCTGCA GATCGAGGCC AATGCCGCCT CCGACAACCC GCTGGTCTTC GACAACGGCG ACGTGATCTC CGGCGGCAAC TTCCACGCCG AGCCGGTGGC CTTTGCGGCC GACATCATCG CGCTGGCCGT GGCCGAGATC GGCGCGATTG CCGAGCGCCG CCTGGCACTG CTGCTCGACA CCGGCCTCTC CGGCCTGCCG CCTTTCCTGG TGCGCGATGG CGGCGTCAAC TCCGGCTTCA TGATTGCCCA GGTCACCGCC GCCGCGCTGG CCTCGGAAAA CAAATCCCTG GCGCACCCGG CCAGCGTGGA CAGCCTGCCC ACCTCGGCCA ACCAGGAGGA CCATGTGTCG ATGGCGACCT TCGCCGCGCG CCGCCTGGGC GAGATGGTGA ACAACACCGC CGTCGTCGTC GGCATCGAAG CCATGGGCGC TGCTCAAGGC ATAGAACTCA AGCGCGGGCT CAAAAGCTCC CCGCTGATCG AAGCCGAGTT CGCCCGCATC CGCGGGAAGG TGGCCTTCCT CGACCAGGAC CGCTTCCTCG CGACCGACGT CGAAGCCATG CGCCAGTGGG CCTTGCACAG CGACTGGCCC GCCGCCCTGC AGCAGATCCT GCCCAGCCAC GCCACCGCGG CCTGA
|
Protein sequence | MTTSTHILHP GRVSLALLRS IHAGGVQLAL APEARAGLLA AQATVQRIVD EDQVVYGINT GFGKLASTKI APNRLVELQR NLVLSHSVGT GEPLPAAVVR VILATKAVSL ARGHSGVRPE LVDALLALAN AGVMPRIPAK GSVGASGDLA PLAHLACVLI GEGQATTADG EVISGAQAMR RIGVAPFVLG PKEGLALLNG TQVSTALALA GLFGAEQVFA AGLVSGALSL EAVQGSIKPF DARVHAARGQ PGQMAVAAAV RTLLEGSEIV PSHPDCGRVQ DPYSIRCVPQ VMGACLDNLQ HAARVLQIEA NAASDNPLVF DNGDVISGGN FHAEPVAFAA DIIALAVAEI GAIAERRLAL LLDTGLSGLP PFLVRDGGVN SGFMIAQVTA AALASENKSL AHPASVDSLP TSANQEDHVS MATFAARRLG EMVNNTAVVV GIEAMGAAQG IELKRGLKSS PLIEAEFARI RGKVAFLDQD RFLATDVEAM RQWALHSDWP AALQQILPSH ATAA
|
| |