| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1028 |
|---|
| Symbol | |
|---|
| ID | 4012149 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 1055316 |
|---|
| End bp | 1055792 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637940706 |
|---|
| Product | histidine triad (HIT) protein |
|---|
| Protein accession | YP_547879 |
|---|
| Protein GI | 91786927 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0201667 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.147797 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGCGCCTG AGACAGGCAC GCGGCCCAAC GGGGTGACGC CACATGTCGA CCCCACCTGC
CGCTACTGCA CGGCGACGGT GGCGGAACTT GAGGACGTGA TGTTCCATGT CGCCGACCTG
GACCGCTCGC GGGTTTTCCT GTTCAGGGAC CAGACGCACC AGGGCCGCTG CGTCGTGCTG
CTGAAAAAGC ACGTGCGGGA GCTGTTCGAG CTGGAGGACG AAGACCTGCG CGTTTTCATG
CGCGAGGTCG CCCGGGTGGC GGCCGCGGTG GCGCAAGTCA GCGCCTGCGA CAAGGTGAAC
TACGCGCTGT ACGGCGACAG GGCCAACCAC CTCCATGTGC ACGTCGTGCC GAAGACACGG
AGCGGCCCGG CCTGGGGCCA GCCCTTTATC CTCAACGCGG ACGTTCCGGT GGCGCTTGCA
CCGCCAGAGC GGCAGGCCAT GCTAATAAAA CTGAAGCACC TGCTGCAGGC TGAATAA
|
|---|
| Protein sequence | MAPETGTRPN GVTPHVDPTC RYCTATVAEL EDVMFHVADL DRSRVFLFRD QTHQGRCVVL
LKKHVRELFE LEDEDLRVFM REVARVAAAV AQVSACDKVN YALYGDRANH LHVHVVPKTR
SGPAWGQPFI LNADVPVALA PPERQAMLIK LKHLLQAE
|
|---|
| |