Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_1027 |
Symbol | |
ID | 4012148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 1053873 |
End bp | 1055027 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637940705 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_547878 |
Protein GI | 91786926 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000299575 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.161964 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTTCA AGCGCAGAGC CATGATCGCC ACGGCAGCGG CCTCGGCCCT TTTTCTCAGC CCTCAACTGT GGGCGCAGGC CCAGCCCATC AAAATCTTCA ACGTGGTCGA GCTCTCCGGC ACCGGGGCAA CGGCAGGCAC CATGTTCAAG TCCGGCATTG AACTGGCGGT CAAGGACGTC AATGCCTCCG GCGGCATCCT GGGGCGCAAG CTTGAGGTGA CCAACATGGA CACCCAGACC AATCCCGGCA TTGCCAAGGC GCTGGTGGTA CGCGCCATTG ATGACGGCGC GTTTGCCATC TTCGGCCCTG TCTTCAGCGG CTCCATCCTG ATCAGCCAGA CCGAGACGCG GCGTGCCGAG GTGCCCAATT TCACGGCCGC TGCCGGGGCC CTGGTGACCC AGCAGGGCAG CCCCTATATC TTTCGCACCG GGCTGACCCA GGTCAACAGC ATGCCCAAGG CCGCACGCTA CATCGCCCGA AACCTGAAGA TCAAGAAAAT CGCCGTGCTG TTCGTCAACA ACGACTTCGG CAAACCCGGG CGCGACGCCA TCGTCGGTGC CCTGAAAACC TTTGGTGTGG AGGTGGTGGC GGACATTTCC ACCGAAGCCG GCCAGCTCGA TTTCTCCGCG CCCATCATCA AGGTGAAGCA GGCCGGCGCC GAGGCGGTGT TTGTCTATCT GAACGAAGAA GAGTCGGCAC GGGCGGTGCG CGAACTGCGC AAGCAAGGTT GGGACAAGCC CATCGTGGGC GACGTGACGC TGCTGAGCCA GAAGGTGATC GATTTGGCGG GCGACGCGGC CAACGGCGTG GTCGGGCACT CCGAAATGTC GGCCGACGCG CCGATTGCCG GCGTGAAAGT GGTGCGCGAC AAGTTCTTCA AGGAATACAA CTTCCTGCCC GACCACAACG GCATCAAGGG CTACCAGGGT GTTTACATGC TCAAGGCGGC GATCCAGAAA GTCGGCAAGT TCGACCGCGT GGCGGTGGCC AAACAGTTGC ACGGCATGAC CATCAAGGTG GCGGACGAAC CCGGCGTGCT GATGGATGTC ACCTTCGATG ACAAGGGCGA CATCGACCGC GAGAGCTTCC TCATCGAGAT CAAGGGCGGC AAACCCGTGG TCAAGGAAGT CCTGCCGCCT CTGGGCAAGA ACTGA
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Protein sequence | MTFKRRAMIA TAAASALFLS PQLWAQAQPI KIFNVVELSG TGATAGTMFK SGIELAVKDV NASGGILGRK LEVTNMDTQT NPGIAKALVV RAIDDGAFAI FGPVFSGSIL ISQTETRRAE VPNFTAAAGA LVTQQGSPYI FRTGLTQVNS MPKAARYIAR NLKIKKIAVL FVNNDFGKPG RDAIVGALKT FGVEVVADIS TEAGQLDFSA PIIKVKQAGA EAVFVYLNEE ESARAVRELR KQGWDKPIVG DVTLLSQKVI DLAGDAANGV VGHSEMSADA PIAGVKVVRD KFFKEYNFLP DHNGIKGYQG VYMLKAAIQK VGKFDRVAVA KQLHGMTIKV ADEPGVLMDV TFDDKGDIDR ESFLIEIKGG KPVVKEVLPP LGKN
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