| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1025 |
|---|
| Symbol | |
|---|
| ID | 4012146 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 1051461 |
|---|
| End bp | 1052243 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637940703 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_547876 |
|---|
| Protein GI | 91786924 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1432] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0102117 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.260028 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCACA AACCGCGCGT TGCCCTGCTG ATTGACGCCG ACAATTCACC GGCGTCCAAA
ATAGACCTGA TCCTCAACGA GTTGTCGACC TTTGGCGAGA CCAATATTCG CCGTGCTTAC
GGCAACTGGA AAAAGAGCGA ACTCAAGGGC TGGGAAGAAG CGCTGCATGA GCATGCCATT
CGCCCCATGC AGCAGTTTGA CTACAGCAAA GGCAAAAACG CCAGCGACAT GGCCATGGTG
ATTGACGCGC TGGAGCTGCT CTACACCGAC CGGCCCGATG CCTTTGGCAT TGTGTCGTCC
GATGCCGACT TCACGCCGCT GGTGATGCAC CTGCGTGCCA AGGGCGCGGC CGTTTACGGG
TTTGGCGCGC AGAAGACGCC CGAACCTTTT GTGAACGCAT GTTCGAAGTT CCTGTTCCTG
GATAAATTGC GTCCCCTGGC CATGGGCGAT GCCGCAGGCG GCGCTGCCGG GGACACCCGC
GATGACGGCG AGGCGGTGAC TGCGGCCCCC TTGCGTGCCA CGCCGGCGCA GCTCAAGCAG
GACGCCAAGC TCGTCATGCT GCTGCGCAAT GCCGTGCAGG CGGCGGCCGA TGACGAGGGC
TGGGCGCGCG TGGGAGCGGT AGGCACCCAG ATCGCCAACC AGGCCTCGTT TGACCATCGC
AACTATGGTT ATGCGACGCT GACCAAACTG CTGGTCGCCA CGCAGCTGTT TGAAATCGCC
GACGAAGGCA AGTCCACCGT GGCAGTGCGC GACAAGCGGC TGAACAAAAC GGCCCGGGCC
TGA
|
|---|
| Protein sequence | MDHKPRVALL IDADNSPASK IDLILNELST FGETNIRRAY GNWKKSELKG WEEALHEHAI
RPMQQFDYSK GKNASDMAMV IDALELLYTD RPDAFGIVSS DADFTPLVMH LRAKGAAVYG
FGAQKTPEPF VNACSKFLFL DKLRPLAMGD AAGGAAGDTR DDGEAVTAAP LRATPAQLKQ
DAKLVMLLRN AVQAAADDEG WARVGAVGTQ IANQASFDHR NYGYATLTKL LVATQLFEIA
DEGKSTVAVR DKRLNKTARA
|
|---|
| |